Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02539

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
2,687,132	+		CCNA_02538	0.11	+1.2
2,687,201	+		CCNA_02538	0.17	-0.9
2,687,209	-		CCNA_02538	0.18	+0.2
2,687,215	-		CCNA_02538	0.19	+0.6
2,687,240	-		CCNA_02538	0.21	+1.7
2,687,258	+		CCNA_02538	0.23	+0.3
2,687,279	+		CCNA_02538	0.25	+1.9
2,687,287	-		CCNA_02538	0.26	+0.3
2,687,287	-		CCNA_02538	0.26	+1.0
2,687,295	-		CCNA_02538	0.27	+0.9
2,687,303	+		CCNA_02538	0.27	+1.9
2,687,308	-		CCNA_02538	0.28	-0.8
2,687,311	-		CCNA_02538	0.28	+0.5
2,687,323	-		CCNA_02538	0.29	-0.7
2,687,327	+		CCNA_02538	0.30	-0.9
2,687,337	+		CCNA_02538	0.31	+0.5
2,687,368	-		CCNA_02538	0.34	+2.9
2,687,394	-		CCNA_02538	0.36	+1.6
2,687,399	-		CCNA_02538	0.37	+1.8
2,687,419	-		CCNA_02538	0.39	+1.6
2,687,518	+		CCNA_02538	0.48	+1.0
2,687,523	+		CCNA_02538	0.49	-0.6
2,687,526	-		CCNA_02538	0.49	-0.6
2,687,527	-		CCNA_02538	0.49	+0.7
2,687,554	-		CCNA_02538	0.52	-2.2
2,687,556	+		CCNA_02538	0.52	-2.9
2,687,576	+		CCNA_02538	0.54	-0.4
2,687,579	-		CCNA_02538	0.54	-0.3
2,687,582	-		CCNA_02538	0.55	+0.2
2,687,584	-		CCNA_02538	0.55	-0.5
2,687,584	-		CCNA_02538	0.55	-0.4
2,687,584	-		CCNA_02538	0.55	-2.0
2,687,608	+		CCNA_02538	0.57	+2.4
2,687,623	-		CCNA_02538	0.59	+1.6
2,687,657	+		CCNA_02538	0.62	+0.6
2,687,657	+		CCNA_02538	0.62	+0.4
2,687,669	+		CCNA_02538	0.63	+1.7
2,687,763	+		CCNA_02538	0.72	-0.8
2,687,771	-		CCNA_02538	0.73	+1.0
2,687,786	-		CCNA_02538	0.75	-1.5
2,687,788	+		CCNA_02538	0.75	-0.5
2,687,788	+		CCNA_02538	0.75	+1.6
2,687,788	+		CCNA_02538	0.75	+3.0
2,687,793	+		CCNA_02538	0.75	+0.6
2,687,793	+		CCNA_02538	0.75	-1.6
2,687,793	+		CCNA_02538	0.75	-0.2
2,687,796	-		CCNA_02538	0.76	+1.0
2,687,796	-		CCNA_02538	0.76	-2.3
2,687,796	-		CCNA_02538	0.76	-1.3
2,687,796	-		CCNA_02538	0.76	-1.4
2,687,796	-		CCNA_02538	0.76	-1.9
2,687,798	+		CCNA_02538	0.76	+0.8
2,687,801	-		CCNA_02538	0.76	-0.4
2,687,801	-		CCNA_02538	0.76	+0.9
2,687,801	-		CCNA_02538	0.76	+1.2
2,687,821	-		CCNA_02538	0.78	-3.5
2,687,903	+		CCNA_02538	0.86	-0.0
2,687,911	-		CCNA_02538	0.87	-0.9
2,687,934	-		CCNA_02538	0.89	-0.7
2,687,938	+		CCNA_02538	0.89	-1.2
2,687,999	+				+0.8
2,688,009	+				-0.9
2,688,009	+				-2.2
2,688,009	+				+0.6
2,688,017	-				-0.0
2,688,023	-				+1.3
2,688,075	+				-0.5
2,688,083	-				-0.2
2,688,143	+				-2.3
2,688,151	-				-0.2
2,688,196	-				+2.7
2,688,233	+				+2.2
2,688,241	-				+0.8
2,688,241	-				-0.4
2,688,241	-				-1.0
2,688,251	+		CCNA_02539	0.10	+1.5
2,688,251	+		CCNA_02539	0.10	+2.3
2,688,257	+		CCNA_02539	0.11	+0.2
2,688,258	+		CCNA_02539	0.11	-0.7
2,688,258	+		CCNA_02539	0.11	-2.1
2,688,263	+		CCNA_02539	0.11	+2.3
2,688,266	-		CCNA_02539	0.12	+1.7
2,688,266	-		CCNA_02539	0.12	+0.2
2,688,270	+		CCNA_02539	0.12	+2.6
2,688,278	-		CCNA_02539	0.13	-0.2
2,688,346	+		CCNA_02539	0.19	+3.1
2,688,354	-		CCNA_02539	0.19	+1.8
2,688,387	+		CCNA_02539	0.22	-3.0
2,688,387	+		CCNA_02539	0.22	+1.5
2,688,395	-		CCNA_02539	0.23	-1.5
2,688,395	-		CCNA_02539	0.23	-0.7
2,688,395	-		CCNA_02539	0.23	-0.0
2,688,395	-		CCNA_02539	0.23	+0.3
2,688,428	+		CCNA_02539	0.26	+0.1
2,688,435	-		CCNA_02539	0.26	+0.6
2,688,436	-		CCNA_02539	0.27	-0.6
2,688,454	+		CCNA_02539	0.28	-3.5
2,688,459	+		CCNA_02539	0.29	+0.3
2,688,459	+		CCNA_02539	0.29	-0.5
2,688,459	+		CCNA_02539	0.29	+1.6
2,688,459	+		CCNA_02539	0.29	+0.9
2,688,459	+		CCNA_02539	0.29	+1.7
2,688,467	-		CCNA_02539	0.29	+0.2
2,688,467	-		CCNA_02539	0.29	-0.1
2,688,467	-		CCNA_02539	0.29	+0.2
2,688,467	-		CCNA_02539	0.29	+1.5
2,688,467	-				+1.2
2,688,472	-		CCNA_02539	0.30	-1.3
2,688,521	+		CCNA_02539	0.34	+0.7
2,688,565	-		CCNA_02539	0.38	-3.0
2,688,572	-		CCNA_02539	0.38	-1.3
2,688,606	+		CCNA_02539	0.41	+0.2
2,688,656	+		CCNA_02539	0.46	+0.2
2,688,667	+		CCNA_02539	0.47	-0.5
2,688,669	+		CCNA_02539	0.47	+0.6
2,688,674	+		CCNA_02539	0.47	-0.2
2,688,677	-		CCNA_02539	0.48	-1.5
2,688,682	-		CCNA_02539	0.48	+0.2
2,688,682	-		CCNA_02539	0.48	+2.9
2,688,682	-		CCNA_02539	0.48	-0.6
2,688,682	-		CCNA_02539	0.48	+0.7
2,688,682	-		CCNA_02539	0.48	+0.7
2,688,682	-		CCNA_02539	0.48	+2.4
2,688,684	+		CCNA_02539	0.48	-2.2
2,688,728	+		CCNA_02539	0.52	+1.7
2,688,728	+		CCNA_02539	0.52	+1.7
2,688,822	+		CCNA_02539	0.60	+0.2
2,688,827	+		CCNA_02539	0.61	+1.3
2,688,835	-		CCNA_02539	0.61	+1.0
2,688,855	+		CCNA_02539	0.63	+2.0
2,688,890	+		CCNA_02539	0.66	+0.5
2,688,911	+		CCNA_02539	0.68	-1.6
2,688,924	+		CCNA_02539	0.69	+1.0
2,688,941	-		CCNA_02539	0.71	+0.6
2,688,941	-		CCNA_02539	0.71	-0.2
2,688,954	+		CCNA_02539	0.72	+0.6
2,688,968	-		CCNA_02539	0.73	+0.5
2,689,014	+		CCNA_02539	0.77	+1.4
2,689,014	+		CCNA_02539	0.77	-1.6
2,689,021	+		CCNA_02539	0.78	+0.3
2,689,021	+		CCNA_02539	0.78	+0.3
2,689,029	-		CCNA_02539	0.78	+2.7
2,689,029	-		CCNA_02539	0.78	+2.1
2,689,029	-		CCNA_02539	0.78	+4.3
2,689,061	-		CCNA_02539	0.81	+1.0
2,689,118	-		CCNA_02539	0.86	+1.9
2,689,131	-		CCNA_02539	0.87	+3.6
2,689,149	-		CCNA_02539	0.89	+2.1
2,689,153	+		CCNA_02539	0.89	+1.5
2,689,153	+		CCNA_02539	0.89	+1.9
2,689,202	+				-1.8
2,689,208	-				+1.7
2,689,270	-				+2.6
2,689,280	-				-0.8
2,689,339	+				-0.9
2,689,353	-				+0.2
2,689,403	+				-0.9
2,689,403	+				+0.3
2,689,429	-				+0.1
2,689,434	-				+0.3
2,689,434	-				-0.1
2,689,449	-				+0.6
2,689,465	+				+1.7
2,689,486	+				+0.7
2,689,609	-		CCNA_02540	0.15	-2.5
2,689,621	+		CCNA_02540	0.16	+2.8
2,689,640	-		CCNA_02540	0.18	-0.6
2,689,643	+		CCNA_02540	0.18	-1.8
2,689,655	-		CCNA_02540	0.19	+0.1
2,689,667	+		CCNA_02540	0.20	+0.1
2,689,667	+		CCNA_02540	0.20	+2.8
2,689,667	+		CCNA_02540	0.20	+0.3
2,689,675	-		CCNA_02540	0.21	-0.0
2,689,686	+		CCNA_02540	0.21	+1.8
2,689,686	+		CCNA_02540	0.21	+1.6
2,689,700	+		CCNA_02540	0.22	-1.8
2,689,708	-		CCNA_02540	0.23	-1.6
2,689,708	-		CCNA_02540	0.23	+1.0
2,689,708	-		CCNA_02540	0.23	+0.0
2,689,708	-		CCNA_02540	0.23	+0.6
2,689,708	-		CCNA_02540	0.23	+0.8
2,689,711	+		CCNA_02540	0.23	+2.0
2,689,729	-		CCNA_02540	0.25	+1.6
2,689,785	+		CCNA_02540	0.29	+0.4
2,689,797	+		CCNA_02540	0.30	-2.0
2,689,800	+		CCNA_02540	0.30	-1.9
2,689,808	-		CCNA_02540	0.31	-1.2
2,689,828	-		CCNA_02540	0.32	+3.2
2,689,837	-		CCNA_02540	0.33	-0.9
2,689,844	+		CCNA_02540	0.34	+0.6
2,689,893	-		CCNA_02540	0.37	-0.7
2,689,935	+		CCNA_02540	0.41	+0.1
2,690,016	+		CCNA_02540	0.47	+1.0
2,690,024	-		CCNA_02540	0.47	-0.2
2,690,024	-		CCNA_02540	0.47	-0.7
2,690,038	+		CCNA_02540	0.48	+1.3
2,690,048	+		CCNA_02540	0.49	+1.2
2,690,058	-		CCNA_02540	0.50	+1.0
2,690,129	+		CCNA_02540	0.56	-0.1
2,690,134	+		CCNA_02540	0.56	-1.0
2,690,154	+		CCNA_02540	0.57	-0.2
2,690,160	+		CCNA_02540	0.58	+0.1
2,690,221	-		CCNA_02540	0.63	-1.9
2,690,221	-		CCNA_02540	0.63	-0.4
2,690,222	+		CCNA_02540	0.63	+2.0
2,690,235	-		CCNA_02540	0.64	+1.1
2,690,249	-		CCNA_02540	0.65	-0.7
2,690,259	-		CCNA_02540	0.66	+1.2
2,690,259	-		CCNA_02540	0.66	+1.2
2,690,259	-		CCNA_02540	0.66	-0.3
2,690,259	-		CCNA_02540	0.66	-2.4