Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_06430

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,423,544	+		AO356_06425	0.48	+0.1
1,423,545	-		AO356_06425	0.48	+0.6
1,423,545	-		AO356_06425	0.48	-0.1
1,423,545	-		AO356_06425	0.48	+0.6
1,423,545	-		AO356_06425	0.48	-0.1
1,423,545	-		AO356_06425	0.48	+0.7
1,423,545	-		AO356_06425	0.48	+0.1
1,423,697	+		AO356_06425	0.60	-2.0
1,423,697	+		AO356_06425	0.60	+0.2
1,423,697	+		AO356_06425	0.60	+0.9
1,423,697	+		AO356_06425	0.60	+0.1
1,423,697	+		AO356_06425	0.60	-0.8
1,423,698	-		AO356_06425	0.60	+0.7
1,423,698	-		AO356_06425	0.60	+0.7
1,423,711	-		AO356_06425	0.61	-0.0
1,423,724	+		AO356_06425	0.62	-0.0
1,423,724	+		AO356_06425	0.62	+0.7
1,423,725	-		AO356_06425	0.62	-0.8
1,423,732	-		AO356_06425	0.62	+0.4
1,423,745	+		AO356_06425	0.63	-1.9
1,423,786	-		AO356_06425	0.67	-0.1
1,424,027	+		AO356_06425	0.85	+0.3
1,424,027	+		AO356_06425	0.85	+0.4
1,424,028	-		AO356_06425	0.85	+0.1
1,424,029	+		AO356_06425	0.85	+1.1
1,424,126	+				-0.6
1,424,127	-				-0.6
1,424,127	-				+0.4
1,424,127	-				+0.3
1,424,127	-				-0.6
1,424,127	-				+0.3
1,424,296	+				-0.2
1,424,296	+				+0.5
1,424,296	+				-0.1
1,424,346	+				-0.7
1,424,346	+				-0.7
1,424,346	+				-1.1
1,424,346	+				+0.2
1,424,346	+				+0.6
1,424,346	+				-1.5
1,424,346	+				-0.0
1,424,346	+				-0.9
1,424,346	+				-0.2
1,424,347	-				+0.7
1,424,347	-				+0.3
1,424,347	-				+0.5
1,424,347	-				+0.7
1,424,347	-				+0.9
1,424,347	-				-0.3
1,424,347	-				-1.0
1,424,347	-				-0.2
1,424,347	-				+0.5
1,424,395	-				-0.5
1,424,395	-				-0.0
1,424,395	-				+0.3
1,424,406	+				-0.1
1,424,413	+				-0.4
1,424,494	+				+0.3
1,424,494	+				+0.6
1,424,494	+				-0.7
1,424,494	+				+1.1
1,424,494	+				+1.1
1,424,494	+				-0.4
1,424,494	+				+0.5
1,424,494	+				+1.1
1,424,494	+				+0.0
1,424,495	-				+0.2
1,424,495	-				-0.4
1,424,495	-				-0.1
1,424,495	-				+0.2
1,424,495	-				+0.7
1,424,495	-				-0.9
1,424,495	-				+0.3
1,424,495	-				-1.1
1,424,495	-				+0.6
1,424,495	-				+0.8
1,424,495	-				+0.4
1,424,495	-				+0.8
1,424,495	-				+0.3
1,424,495	-				-0.1
1,424,681	-		AO356_06430	0.13	+0.2
1,424,815	+		AO356_06430	0.18	-0.0
1,424,857	+		AO356_06430	0.20	-1.4
1,424,911	+		AO356_06430	0.22	-0.4
1,424,912	-		AO356_06430	0.22	-0.6
1,424,932	+		AO356_06430	0.23	+0.6
1,424,933	-		AO356_06430	0.23	-0.5
1,424,933	-		AO356_06430	0.23	+0.2
1,425,039	+		AO356_06430	0.27	-0.6
1,425,039	+		AO356_06430	0.27	+0.2
1,425,039	+		AO356_06430	0.27	-0.9
1,425,039	+		AO356_06430	0.27	+1.6
1,425,040	-		AO356_06430	0.27	-0.4
1,425,040	-		AO356_06430	0.27	-0.1
1,425,040	-		AO356_06430	0.27	+0.3
1,425,040	-		AO356_06430	0.27	+0.1
1,425,177	+		AO356_06430	0.33	+0.3
1,425,177	+		AO356_06430	0.33	+0.4
1,425,177	+		AO356_06430	0.33	-0.0
1,425,177	+		AO356_06430	0.33	+0.8
1,425,177	+		AO356_06430	0.33	-0.3
1,425,177	+		AO356_06430	0.33	-0.7
1,425,178	-		AO356_06430	0.33	+0.4
1,425,178	-		AO356_06430	0.33	-0.0
1,425,178	-		AO356_06430	0.33	-0.9
1,425,178	-		AO356_06430	0.33	-0.7
1,425,178	-		AO356_06430	0.33	+0.8
1,425,178	-		AO356_06430	0.33	-0.2
1,425,341	-		AO356_06430	0.40	-0.4
1,425,358	+		AO356_06430	0.41	+2.3
1,425,358	+		AO356_06430	0.41	-0.4
1,425,358	+		AO356_06430	0.41	-1.7
1,425,359	-		AO356_06430	0.41	-0.9
1,425,394	+		AO356_06430	0.42	+0.8
1,425,395	-		AO356_06430	0.42	+1.8
1,425,395	-		AO356_06430	0.42	+0.7
1,425,395	-		AO356_06430	0.42	-1.3
1,425,505	+		AO356_06430	0.47	+0.3
1,425,506	-		AO356_06430	0.47	-0.2
1,425,610	+		AO356_06430	0.51	+1.2
1,425,610	+		AO356_06430	0.51	-0.0
1,425,611	-		AO356_06430	0.51	+1.0
1,425,670	+		AO356_06430	0.54	-0.4
1,425,670	+		AO356_06430	0.54	+0.4
1,425,670	+		AO356_06430	0.54	+0.5
1,425,670	+		AO356_06430	0.54	-0.6
1,425,670	+		AO356_06430	0.54	-0.5
1,425,671	-		AO356_06430	0.54	-0.2
1,425,671	-		AO356_06430	0.54	+2.0
1,425,671	-		AO356_06430	0.54	-0.3
1,425,671	-		AO356_06430	0.54	-0.0
1,425,772	+		AO356_06430	0.58	-0.4
1,425,773	-		AO356_06430	0.58	+0.4
1,425,773	-		AO356_06430	0.58	-0.5
1,425,773	-		AO356_06430	0.58	-0.4
1,425,773	-		AO356_06430	0.58	-0.4
1,425,844	+		AO356_06430	0.61	-0.3
1,425,845	-		AO356_06430	0.61	-0.3
1,425,845	-		AO356_06430	0.61	-0.1
1,425,958	+		AO356_06430	0.65	-0.1
1,425,959	-		AO356_06430	0.66	-0.1
1,425,959	-		AO356_06430	0.66	+0.1
1,425,959	-		AO356_06430	0.66	+0.4
1,426,405	+		AO356_06430	0.84	+0.7
1,426,405	+		AO356_06430	0.84	-0.0
1,426,405	+		AO356_06430	0.84	+0.9
1,426,406	-		AO356_06430	0.84	-0.3
1,426,406	-		AO356_06430	0.84	-1.2
1,426,478	+		AO356_06430	0.87	-0.5
1,426,479	-		AO356_06430	0.87	+0.3
1,426,724	-				+0.4
1,426,799	+				-0.3
1,426,800	-				-0.2
1,426,802	-				+0.0
1,426,810	+				-1.1
1,426,954	-				-0.4
1,426,954	-				+1.2
1,427,006	+				+0.8
1,427,006	+				+0.9
1,427,006	+				-1.7
1,427,006	+				+0.2
1,427,006	+				-0.4
1,427,006	+				+0.1
1,427,006	+				+0.1
1,427,006	+				+0.4
1,427,006	+				-2.5
1,427,006	+				+0.4
1,427,007	-				-1.4
1,427,206	+		AO356_06435	0.51	+0.5
1,427,206	+		AO356_06435	0.51	+0.4
1,427,206	+		AO356_06435	0.51	-0.1
1,427,206	+		AO356_06435	0.51	+0.9
1,427,206	+		AO356_06435	0.51	-0.2
1,427,206	+		AO356_06435	0.51	-0.4
1,427,207	-		AO356_06435	0.51	+0.6
1,427,207	-		AO356_06435	0.51	-0.1
1,427,233	-		AO356_06435	0.58	-0.9
1,427,331	+		AO356_06435	0.82	+0.3
1,427,331	+		AO356_06435	0.82	-0.0
1,427,331	+		AO356_06435	0.82	+0.8
1,427,331	+		AO356_06435	0.82	+0.2
1,427,331	+		AO356_06435	0.82	-0.9
1,427,331	+		AO356_06435	0.82	+0.3
1,427,332	-		AO356_06435	0.83	-0.2
1,427,332	-		AO356_06435	0.83	-2.3
1,427,332	-		AO356_06435	0.83	+0.2
1,427,441	+				-0.6
1,427,441	+				+0.1
1,427,441	+				-1.2
1,427,441	+				+0.1
1,427,442	-				+1.9
1,427,442	-				-0.9
1,427,442	-				+0.7
1,427,442	-				+0.4
1,427,442	-				-0.7
1,427,442	-				-1.4
1,427,442	-				-0.1
1,427,447	+				-0.3
1,427,664	-		AO356_06440	0.41	-0.1
1,427,664	-		AO356_06440	0.41	+0.9
1,427,675	+		AO356_06440	0.43	+0.2
1,427,676	-		AO356_06440	0.43	-0.5