Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04435

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,003,626	+		AO356_04430	0.54	+0.3
1,003,627	-		AO356_04430	0.54	-0.6
1,003,627	-		AO356_04430	0.54	-0.3
1,003,629	-		AO356_04430	0.54	-0.3
1,003,784	+		AO356_04430	0.64	+0.8
1,003,785	-		AO356_04430	0.64	+0.4
1,003,785	-		AO356_04430	0.64	+0.4
1,003,805	+		AO356_04430	0.65	-1.3
1,003,805	+		AO356_04430	0.65	+0.1
1,003,805	+		AO356_04430	0.65	-0.0
1,003,805	+		AO356_04430	0.65	+0.2
1,003,805	+		AO356_04430	0.65	-0.4
1,003,806	-		AO356_04430	0.65	-0.0
1,003,806	-		AO356_04430	0.65	+0.6
1,003,806	-		AO356_04430	0.65	+0.3
1,003,806	-		AO356_04430	0.65	-0.8
1,003,846	-		AO356_04430	0.68	-1.2
1,003,871	+		AO356_04430	0.69	-1.2
1,003,871	+		AO356_04430	0.69	-0.2
1,003,871	+		AO356_04430	0.69	-0.3
1,003,872	-		AO356_04430	0.69	+0.8
1,003,872	-		AO356_04430	0.69	-0.4
1,003,872	-		AO356_04430	0.69	-0.2
1,003,872	-		AO356_04430	0.69	-1.7
1,003,872	-		AO356_04430	0.69	+0.3
1,003,929	+		AO356_04430	0.73	+0.1
1,003,929	+		AO356_04430	0.73	+0.8
1,003,929	+		AO356_04430	0.73	-0.7
1,003,930	-		AO356_04430	0.73	-0.4
1,003,960	+		AO356_04430	0.75	+0.6
1,004,013	+		AO356_04430	0.78	+0.3
1,004,014	-		AO356_04430	0.78	-0.6
1,004,014	-		AO356_04430	0.78	-0.6
1,004,014	-		AO356_04430	0.78	-0.6
1,004,015	+		AO356_04430	0.78	+0.3
1,004,101	+		AO356_04430	0.83	-0.4
1,004,101	+		AO356_04430	0.83	+0.7
1,004,123	+		AO356_04430	0.84	-0.8
1,004,124	-		AO356_04430	0.84	-0.2
1,004,367	+				+0.7
1,004,368	-				-0.1
1,004,371	-				+0.4
1,004,452	-				+1.0
1,004,520	+				-0.3
1,004,560	+				+0.3
1,004,629	+				-0.4
1,004,629	+				-0.2
1,004,629	+				-0.7
1,004,630	-				-0.9
1,004,630	-				+0.1
1,004,630	-				+0.7
1,004,737	+		AO356_04435	0.14	+0.0
1,004,738	-		AO356_04435	0.14	+0.6
1,004,738	-		AO356_04435	0.14	-0.5
1,004,781	+		AO356_04435	0.17	-0.3
1,004,781	+		AO356_04435	0.17	-2.1
1,004,781	+		AO356_04435	0.17	-0.2
1,004,782	-		AO356_04435	0.17	-0.0
1,004,782	-		AO356_04435	0.17	-0.2
1,004,782	-		AO356_04435	0.17	+0.6
1,004,782	-		AO356_04435	0.17	-0.4
1,004,824	+		AO356_04435	0.20	+0.8
1,004,825	-		AO356_04435	0.20	-0.5
1,004,825	-		AO356_04435	0.20	+0.4
1,004,849	+		AO356_04435	0.22	-0.4
1,004,849	+		AO356_04435	0.22	+0.1
1,004,849	+		AO356_04435	0.22	+2.8
1,004,850	-		AO356_04435	0.22	+0.3
1,004,850	-		AO356_04435	0.22	-0.7
1,004,850	-		AO356_04435	0.22	+0.2
1,004,850	-		AO356_04435	0.22	-1.9
1,004,944	+		AO356_04435	0.29	+1.4
1,004,944	+		AO356_04435	0.29	-0.1
1,004,944	+		AO356_04435	0.29	-0.5
1,004,944	+		AO356_04435	0.29	-0.2
1,005,286	+		AO356_04435	0.54	+0.1
1,005,337	+		AO356_04435	0.57	+0.4
1,005,338	-		AO356_04435	0.57	+0.5
1,005,338	-		AO356_04435	0.57	-0.3
1,005,385	+		AO356_04435	0.61	-0.1
1,005,385	+		AO356_04435	0.61	-0.3
1,005,385	+		AO356_04435	0.61	-0.5
1,005,386	-		AO356_04435	0.61	-0.5
1,005,386	-		AO356_04435	0.61	+0.0
1,005,472	+				+0.4
1,005,472	+		AO356_04435	0.67	-0.2
1,005,473	-		AO356_04435	0.67	-1.0
1,005,473	-		AO356_04435	0.67	-0.0
1,005,473	-		AO356_04435	0.67	-2.3
1,005,505	+		AO356_04435	0.69	+1.2
1,005,506	-		AO356_04435	0.70	+1.1
1,005,746	+		AO356_04435	0.87	-0.6
1,005,746	+		AO356_04435	0.87	+0.9
1,005,747	-		AO356_04435	0.87	-0.3
1,005,773	-		AO356_04435	0.89	+0.1
1,006,019	+				-0.3
1,006,019	+				+0.1
1,006,019	+				-1.0
1,006,019	+				+0.5
1,006,019	+				-0.6
1,006,019	+				+1.2
1,006,020	-				-0.4
1,006,020	-				-0.1
1,006,025	+				+0.1
1,006,025	+				-0.8
1,006,025	+				-1.2
1,006,025	+				+0.8
1,006,025	+				+0.1
1,006,025	+				+0.4
1,006,025	+				-0.5
1,006,026	-				-0.4
1,006,026	-				+0.9
1,006,026	-				-0.7
1,006,026	-				-0.5
1,006,144	+				-0.2
1,006,144	+				+0.4
1,006,145	-				-0.9
1,006,145	-				+0.3
1,006,272	+				-0.2
1,006,272	+				-1.8
1,006,272	+				+0.3
1,006,272	+				-0.4
1,006,272	+				-0.3
1,006,273	-				-0.4
1,006,273	-				+0.1
1,006,273	-				+0.2
1,006,278	+				-0.3
1,006,278	+				-0.4
1,006,319	+				+1.4
1,006,320	-				-0.3
1,006,324	+				-1.9
1,006,324	+				-0.7
1,006,324	+				-0.6
1,006,324	+				+0.2
1,006,324	+				+0.2
1,006,324	+				+2.4
1,006,324	+				-0.5
1,006,324	+				-0.9
1,006,324	+				-0.6
1,006,324	+				+0.9
1,006,324	+				+0.8
1,006,324	+				-0.4
1,006,325	-				-0.6
1,006,325	-				+0.6
1,006,325	-				+0.4
1,006,325	-				+0.4
1,006,325	-				+0.1
1,006,325	-				-0.5
1,006,325	-				+1.2
1,006,325	-				+0.4
1,006,325	-				-0.6
1,006,325	-				+0.5
1,006,459	+				-0.3
1,006,459	+				-1.2
1,006,459	+				-0.3
1,006,459	+				+1.3
1,006,459	+				-0.3
1,006,460	-				+0.1
1,006,460	-				-0.1
1,006,460	-				-0.2
1,006,511	+				-0.4
1,006,511	+				+0.4
1,006,512	-				-0.1
1,006,574	+		AO356_04440	0.14	-0.7
1,006,574	+		AO356_04440	0.14	-0.3
1,006,574	+		AO356_04440	0.14	-0.0
1,006,574	+		AO356_04440	0.14	-0.4
1,006,574	+		AO356_04440	0.14	-1.2
1,006,575	-		AO356_04440	0.14	-1.2
1,006,618	+		AO356_04440	0.18	-0.7
1,006,649	+		AO356_04440	0.22	+0.6
1,006,649	+		AO356_04440	0.22	+0.2
1,006,650	-		AO356_04440	0.22	+0.1
1,006,667	+		AO356_04440	0.23	+0.3
1,006,667	+		AO356_04440	0.23	-0.1
1,006,667	+		AO356_04440	0.23	+0.4
1,006,667	+		AO356_04440	0.23	-0.7
1,006,667	+		AO356_04440	0.23	+0.7
1,006,667	+		AO356_04440	0.23	-0.4
1,006,667	+		AO356_04440	0.23	-0.0
1,006,667	+		AO356_04440	0.23	-0.4
1,006,668	-		AO356_04440	0.24	-0.2
1,006,668	-		AO356_04440	0.24	-0.1
1,006,668	-		AO356_04440	0.24	-1.2
1,006,668	-		AO356_04440	0.24	+0.2
1,006,668	-		AO356_04440	0.24	+1.4
1,006,668	-		AO356_04440	0.24	+1.8
1,006,668	-		AO356_04440	0.24	+1.3
1,006,668	-		AO356_04440	0.24	+0.7
1,006,759	+		AO356_04440	0.33	-0.3
1,006,759	+		AO356_04440	0.33	-0.0
1,006,821	-		AO356_04440	0.40	+0.0