Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3253

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
3,898,001	+		Psyr_3252	0.75	-0.8
3,898,001	+		Psyr_3252	0.75	+0.5
3,898,002	-		Psyr_3252	0.75	-1.3
3,898,079	-		Psyr_3252	0.78	-1.1
3,898,316	+		Psyr_3252	0.86	-0.1
3,898,316	+		Psyr_3252	0.86	+0.4
3,898,316	+		Psyr_3252	0.86	-2.1
3,898,317	-		Psyr_3252	0.86	-0.6
3,898,317	-		Psyr_3252	0.86	-0.1
3,898,397	+		Psyr_3252	0.89	+0.2
3,898,397	+		Psyr_3252	0.89	+0.2
3,898,397	+		Psyr_3252	0.89	+0.7
3,898,397	+		Psyr_3252	0.89	-1.8
3,898,397	+		Psyr_3252	0.89	+0.8
3,898,397	+		Psyr_3252	0.89	+1.7
3,898,397	+		Psyr_3252	0.89	-0.4
3,898,397	+		Psyr_3252	0.89	-1.0
3,898,397	+		Psyr_3252	0.89	-0.8
3,898,397	+		Psyr_3252	0.89	+0.7
3,898,397	+		Psyr_3252	0.89	+1.2
3,898,398	-		Psyr_3252	0.89	-1.3
3,898,398	-		Psyr_3252	0.89	+0.7
3,898,398	-		Psyr_3252	0.89	+0.2
3,898,398	-		Psyr_3252	0.89	+0.9
3,898,398	-		Psyr_3252	0.89	-0.2
3,898,398	-		Psyr_3252	0.89	+1.4
3,898,398	-		Psyr_3252	0.89	+1.2
3,898,398	-		Psyr_3252	0.89	-1.1
3,898,398	-		Psyr_3252	0.89	-1.9
3,898,398	-		Psyr_3252	0.89	-2.1
3,898,450	-				+0.1
3,898,473	+				-0.2
3,898,607	+				-2.3
3,898,608	-				+2.8
3,898,797	+		Psyr_3253	0.21	+1.2
3,898,797	+		Psyr_3253	0.21	-1.8
3,898,797	+		Psyr_3253	0.21	-1.3
3,898,798	-		Psyr_3253	0.21	+1.6
3,898,927	+		Psyr_3253	0.58	+0.8
3,898,927	+		Psyr_3253	0.58	-0.5
3,898,927	+		Psyr_3253	0.58	+0.1
3,898,928	-		Psyr_3253	0.59	+0.9
3,898,928	-		Psyr_3253	0.59	+0.8
3,898,928	-		Psyr_3253	0.59	+1.0
3,899,045	+				+1.0
3,899,045	+				+2.8
3,899,045	+				-0.6
3,899,045	+				-0.6
3,899,045	+				-1.8
3,899,046	-				-0.6
3,899,046	-				+1.2
3,899,046	-				-0.1
3,899,046	-				-1.2
3,899,265	+		Psyr_3254	0.12	+0.7
3,899,266	-		Psyr_3254	0.12	+0.2
3,899,266	-		Psyr_3254	0.12	-0.2
3,899,445	+		Psyr_3254	0.22	-0.5
3,899,497	+		Psyr_3254	0.26	+0.2
3,899,498	-		Psyr_3254	0.26	-0.5
3,899,498	-		Psyr_3254	0.26	+1.2
3,899,568	+		Psyr_3254	0.30	+0.1
3,899,568	+		Psyr_3254	0.30	-1.3
3,899,568	+		Psyr_3254	0.30	+0.1
3,899,568	+		Psyr_3254	0.30	+1.4
3,899,568	+		Psyr_3254	0.30	+0.4
3,899,569	-		Psyr_3254	0.30	-2.2
3,899,847	+		Psyr_3254	0.46	-0.3
3,899,847	+		Psyr_3254	0.46	-0.1
3,899,847	+		Psyr_3254	0.46	-1.9
3,899,847	+		Psyr_3254	0.46	+0.7
3,899,847	+		Psyr_3254	0.46	+0.2
3,899,848	-		Psyr_3254	0.46	-0.4
3,899,848	-		Psyr_3254	0.46	-3.3
3,899,848	-		Psyr_3254	0.46	+0.8
3,899,928	+		Psyr_3254	0.51	-0.1
3,899,928	+		Psyr_3254	0.51	-1.2
3,899,929	-		Psyr_3254	0.51	-1.6
3,900,010	+		Psyr_3254	0.56	-0.8
3,900,010	+		Psyr_3254	0.56	+1.2
3,900,010	+		Psyr_3254	0.56	+0.2
3,900,011	-		Psyr_3254	0.56	-2.1