Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3079

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
3,682,813	+		Psyr_3078	0.42	+0.8
3,682,814	-		Psyr_3078	0.43	-0.0
3,683,073	+		Psyr_3078	0.63	-0.7
3,683,073	+		Psyr_3078	0.63	-0.6
3,683,073	+		Psyr_3078	0.63	-0.4
3,683,073	+		Psyr_3078	0.63	+0.4
3,683,073	+		Psyr_3078	0.63	+0.7
3,683,073	+		Psyr_3078	0.63	+0.0
3,683,074	-		Psyr_3078	0.63	-0.6
3,683,074	-		Psyr_3078	0.63	-1.2
3,683,074	-		Psyr_3078	0.63	+1.4
3,683,074	-		Psyr_3078	0.63	-0.2
3,683,140	+		Psyr_3078	0.69	+0.6
3,683,342	+		Psyr_3078	0.85	-0.2
3,683,343	-		Psyr_3078	0.85	+1.1
3,683,346	+		Psyr_3078	0.85	+1.0
3,683,406	+				-0.5
3,683,406	+				+1.4
3,683,406	+				-0.5
3,683,406	+				-0.0
3,683,407	-				-0.2
3,683,407	-				+1.8
3,683,407	-				-0.2
3,683,407	-				-0.7
3,683,407	-				+0.6
3,683,572	+				+1.0
3,683,572	+				+0.7
3,683,572	+				+0.2
3,683,572	+				-0.4
3,683,573	-				+0.6
3,683,573	-				+0.5
3,683,573	-				+0.4
3,684,085	+				+0.9
3,684,085	+				-0.2
3,684,085	+				-1.1
3,684,085	+				-1.4
3,684,086	-				+1.4
3,684,086	-				-0.2
3,684,086	-				-0.2
3,684,086	-				-1.7
3,684,101	-				-0.6
3,684,101	-				-0.1
3,684,123	+				+1.0
3,684,123	+				-0.6
3,684,124	-				+0.7
3,684,124	-				+0.1
3,684,149	-				-0.8
3,684,257	+				+1.1
3,684,518	-		Psyr_3080	0.16	+0.6
3,684,621	-		Psyr_3080	0.20	+2.0
3,684,805	+		Psyr_3080	0.27	+1.4
3,684,806	-		Psyr_3080	0.27	-2.1
3,684,874	+		Psyr_3080	0.30	-1.8
3,684,875	-		Psyr_3080	0.30	+0.2