Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3022

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
3,619,014	+		Psyr_3021	0.78	-0.9
3,619,014	+		Psyr_3021	0.78	+0.2
3,619,014	+		Psyr_3021	0.78	+0.3
3,619,023	+		Psyr_3021	0.78	-1.9
3,619,024	-		Psyr_3021	0.78	+1.1
3,619,024	-		Psyr_3021	0.78	+1.2
3,619,024	-		Psyr_3021	0.78	+0.1
3,619,027	+		Psyr_3021	0.78	-2.0
3,619,028	-		Psyr_3021	0.78	-0.1
3,619,440	+				+1.9
3,619,464	+				+0.4
3,619,464	+				+1.4
3,619,464	+				-0.2
3,619,464	+				+0.7
3,619,464	+				-0.6
3,619,464	+				+1.4
3,619,465	-				+0.0
3,619,465	-				-1.5
3,619,465	-				+0.5
3,619,465	-				+2.4
3,619,465	-				-0.2
3,619,465	-				+1.4
3,619,569	+				-0.5
3,619,569	+				-0.2
3,619,569	+				-1.4
3,619,569	+				-0.9
3,619,570	-				-2.6
3,619,570	-				+0.8
3,619,743	+				-0.6
3,619,747	+				-0.2
3,619,747	+				-0.3
3,619,783	+				+1.1
3,619,783	+				-1.2
3,619,784	-				-0.0
3,619,784	-				+0.6
3,619,798	+				+1.4
3,619,798	+				+0.7
3,619,799	-				+0.4
3,619,799	-				-1.6
3,619,799	-				+0.2
3,619,800	+				-2.7
3,619,801	-				+0.2
3,619,801	-				-0.3
3,619,801	-				-0.3
3,619,801	-				-0.3
3,620,247	+		Psyr_3022	0.63	+0.9
3,620,248	-		Psyr_3022	0.64	-2.0
3,620,248	-		Psyr_3022	0.64	+0.8
3,620,308	-		Psyr_3022	0.76	+0.8
3,620,386	+				-0.3
3,620,424	+				+0.0
3,620,424	+				+0.7
3,620,425	-				+2.0
3,620,425	-				+0.3
3,620,425	-				+0.9
3,620,495	-				+0.6
3,620,575	-				+2.4
3,620,608	-				+1.4
3,620,661	-				+1.4
3,620,682	-				+2.4
3,620,787	+				-2.4
3,620,787	+				+0.2
3,620,787	+				+2.4
3,620,788	-				-0.2
3,620,788	-				+2.6
3,620,788	-				+0.8
3,620,794	+				-0.7
3,620,843	-				-0.1
3,620,906	-				+0.4
3,620,906	-				+0.5
3,621,032	+		Psyr_3023	0.22	+1.8
3,621,064	+		Psyr_3023	0.28	-1.7
3,621,065	-		Psyr_3023	0.28	-1.4
3,621,214	+		Psyr_3023	0.55	+0.3
3,621,214	+		Psyr_3023	0.55	+1.0
3,621,214	+		Psyr_3023	0.55	-2.4
3,621,215	-		Psyr_3023	0.55	+1.1
3,621,394	+		Psyr_3023	0.88	-0.2