Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2937

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
3,523,539	+		Psyr_2935	0.35	+2.1
3,523,539	+		Psyr_2935	0.35	+0.8
3,523,539	+		Psyr_2935	0.35	+0.5
3,523,540	-		Psyr_2935	0.35	+0.2
3,523,540	-		Psyr_2935	0.35	+1.5
3,523,540	-		Psyr_2935	0.35	-0.7
3,523,540	-		Psyr_2935	0.35	+0.8
3,523,540	-		Psyr_2935	0.35	+0.3
3,523,588	-		Psyr_2935	0.48	-0.1
3,523,588	-		Psyr_2935	0.48	-1.1
3,523,610	+		Psyr_2935	0.53	+1.9
3,523,698	-		Psyr_2935	0.76	+0.1
3,523,698	-		Psyr_2935	0.76	-0.0
3,523,710	+		Psyr_2935	0.79	+0.4
3,523,711	-		Psyr_2935	0.79	+0.2
3,523,719	+		Psyr_2935	0.81	+1.1
3,523,720	-		Psyr_2935	0.82	-0.1
3,523,771	-				-0.1
3,524,240	-		Psyr_2936	0.59	-1.7
3,524,240	-		Psyr_2936	0.59	+0.7
3,524,269	+		Psyr_2936	0.63	-1.1
3,524,269	+		Psyr_2936	0.63	+1.5
3,524,269	+		Psyr_2936	0.63	-0.1
3,524,269	+		Psyr_2936	0.63	-0.3
3,524,270	-		Psyr_2936	0.64	-0.7
3,524,270	-		Psyr_2936	0.64	-0.9
3,524,270	-		Psyr_2936	0.64	+1.3
3,524,270	-		Psyr_2936	0.64	-1.3
3,524,472	+				-0.3
3,524,473	-				+0.7
3,524,823	+		Psyr_2937	0.27	+0.2
3,524,823	+		Psyr_2937	0.27	-0.5
3,524,823	+		Psyr_2937	0.27	+1.5
3,524,823	+		Psyr_2937	0.27	-0.8
3,524,823	+		Psyr_2937	0.27	-1.5
3,524,824	-		Psyr_2937	0.27	+2.1
3,524,824	-		Psyr_2937	0.27	-1.2
3,524,824	-		Psyr_2937	0.27	+0.0
3,525,083	+				-0.8
3,525,083	+		Psyr_2937	0.51	-0.5
3,525,083	+		Psyr_2937	0.51	-0.8
3,525,083	+		Psyr_2937	0.51	+0.3
3,525,083	+		Psyr_2937	0.51	+0.0
3,525,083	+		Psyr_2937	0.51	+0.5
3,525,084	-		Psyr_2937	0.51	-1.2
3,525,084	-		Psyr_2937	0.51	-1.5
3,525,084	-		Psyr_2937	0.51	+1.9
3,525,084	-		Psyr_2937	0.51	+0.2
3,525,084	-		Psyr_2937	0.51	-0.7
3,525,084	-		Psyr_2937	0.51	+1.5
3,525,084	-		Psyr_2937	0.51	+1.5
3,525,207	+		Psyr_2937	0.62	-0.4
3,525,210	+		Psyr_2937	0.62	-1.2
3,525,210	+		Psyr_2937	0.62	-0.1
3,525,211	-		Psyr_2937	0.62	+0.1
3,525,211	-		Psyr_2937	0.62	-1.0
3,525,211	-		Psyr_2937	0.62	-0.5
3,525,211	-		Psyr_2937	0.62	+1.3
3,525,432	+		Psyr_2937	0.83	-1.3
3,525,432	+		Psyr_2937	0.83	-1.5
3,525,433	-		Psyr_2937	0.83	-0.5
3,525,433	-		Psyr_2937	0.83	+0.3
3,525,433	-		Psyr_2937	0.83	-0.3
3,525,484	-		Psyr_2937	0.87	-0.1
3,525,484	-		Psyr_2937	0.87	-0.1
3,525,487	-		Psyr_2937	0.88	+0.2
3,525,731	+				+1.5
3,525,769	+				+0.1
3,525,770	-				+0.2
3,525,770	-				+1.1
3,525,779	-				-1.0
3,525,779	-				+1.1
3,525,779	-				+0.1
3,525,779	-				+1.5
3,526,201	+		Psyr_2938	0.50	-0.6
3,526,471	-		Psyr_2938	0.80	-1.1
3,526,516	+		Psyr_2938	0.85	-1.5
3,526,516	+		Psyr_2938	0.85	-0.5
3,526,517	-		Psyr_2938	0.85	+1.8
3,526,517	-		Psyr_2938	0.85	+0.5
3,526,517	-		Psyr_2938	0.85	+0.8
3,526,517	-		Psyr_2938	0.85	+0.2
3,526,582	+				-2.2
3,526,583	-				+1.4