Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2903

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
3,481,120	+		Psyr_2902	0.47	-0.6
3,481,306	+		Psyr_2902	0.57	-1.3
3,481,306	+		Psyr_2902	0.57	-1.5
3,481,306	+		Psyr_2902	0.57	-0.3
3,481,306	+		Psyr_2902	0.57	-1.7
3,481,306	+		Psyr_2902	0.57	+0.9
3,481,306	+		Psyr_2902	0.57	-1.8
3,481,307	-		Psyr_2902	0.57	+0.5
3,481,307	-		Psyr_2902	0.57	-1.5
3,481,307	-		Psyr_2902	0.57	+0.8
3,481,307	-		Psyr_2902	0.57	-0.8
3,481,307	-		Psyr_2902	0.57	-0.3
3,481,419	-		Psyr_2902	0.63	-1.3
3,481,463	+		Psyr_2902	0.65	-0.8
3,481,613	-		Psyr_2902	0.73	+1.2
3,481,756	+		Psyr_2902	0.81	+0.2
3,481,757	-		Psyr_2902	0.81	+0.5
3,481,804	+		Psyr_2902	0.83	-1.2
3,481,804	+		Psyr_2902	0.83	+1.5
3,481,804	+		Psyr_2902	0.83	-1.2
3,481,804	+		Psyr_2902	0.83	+0.5
3,481,805	-		Psyr_2902	0.84	+0.9
3,481,805	-		Psyr_2902	0.84	+1.5
3,481,805	-		Psyr_2902	0.84	+1.5
3,481,805	-		Psyr_2902	0.84	+0.3
3,481,805	-		Psyr_2902	0.84	+0.0
3,481,805	-		Psyr_2902	0.84	+1.5
3,481,805	-		Psyr_2902	0.84	-0.5
3,481,885	+		Psyr_2902	0.88	-0.8
3,481,886	-		Psyr_2902	0.88	+0.6
3,481,921	+		Psyr_2902	0.90	-0.0
3,481,921	+		Psyr_2902	0.90	-0.1
3,481,921	+		Psyr_2902	0.90	-0.5
3,481,922	-		Psyr_2902	0.90	-0.1
3,481,922	-		Psyr_2902	0.90	-0.8
3,481,922	-		Psyr_2902	0.90	+0.5
3,481,939	+				-0.1
3,481,939	+				+2.5
3,481,939	+				-1.1
3,481,939	+				-2.0
3,481,939	+				-1.8
3,481,940	-				+0.9
3,481,940	-				-2.5
3,481,940	-				-2.3
3,481,940	-				-0.3
3,482,122	+				+0.7
3,482,123	-				-0.3
3,482,124	+				-0.2
3,482,404	+		Psyr_2903	0.27	+0.3
3,482,404	+		Psyr_2903	0.27	+0.1
3,482,405	-		Psyr_2903	0.27	+0.2
3,482,405	-		Psyr_2903	0.27	+0.0
3,482,518	+		Psyr_2903	0.38	-2.6
3,482,518	+		Psyr_2903	0.38	-0.1
3,482,518	+		Psyr_2903	0.38	-0.1
3,482,519	-		Psyr_2903	0.38	-0.1
3,482,746	+		Psyr_2903	0.59	-0.7
3,482,747	-		Psyr_2903	0.60	-0.5
3,482,852	-		Psyr_2903	0.69	+1.2
3,482,900	-		Psyr_2903	0.74	-1.1
3,483,031	+		Psyr_2903	0.86	+0.5
3,483,031	+				-0.5
3,483,031	+		Psyr_2903	0.86	+0.2
3,483,031	+		Psyr_2903	0.86	-0.3
3,483,032	-		Psyr_2903	0.86	+0.5
3,483,108	-				-1.0
3,483,130	+				-0.5
3,483,130	+				-0.6
3,483,342	+		Psyr_2904	0.16	-0.5
3,483,342	+		Psyr_2904	0.16	-0.7
3,483,343	-		Psyr_2904	0.16	-0.3
3,483,364	-		Psyr_2904	0.19	-0.7
3,483,365	+		Psyr_2904	0.19	-0.7
3,483,366	-		Psyr_2904	0.19	-1.6
3,483,429	-		Psyr_2904	0.25	-2.9
3,483,429	-		Psyr_2904	0.25	+0.3
3,483,470	+		Psyr_2904	0.29	+0.3
3,483,498	+		Psyr_2904	0.32	+0.8
3,483,498	+		Psyr_2904	0.32	+0.1
3,483,499	-		Psyr_2904	0.32	-0.8
3,483,499	-		Psyr_2904	0.32	-1.1
3,483,499	-		Psyr_2904	0.32	-1.1
3,483,499	-		Psyr_2904	0.32	-1.3
3,483,678	+		Psyr_2904	0.49	-0.8
3,483,678	+		Psyr_2904	0.49	-0.1
3,483,679	-		Psyr_2904	0.49	-1.5
3,483,681	+		Psyr_2904	0.49	-0.3
3,483,747	+		Psyr_2904	0.56	-0.3
3,483,748	-		Psyr_2904	0.56	+0.1
3,483,748	-		Psyr_2904	0.56	-1.3
3,483,969	+		Psyr_2904	0.77	-0.3
3,483,970	-		Psyr_2904	0.78	-2.0
3,484,153	+				+3.5
3,484,154	-				-0.1
3,484,154	-				+0.1