Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2727

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
3,309,368	+		Psyr_2726	0.74	-1.2
3,309,368	+		Psyr_2726	0.74	+0.6
3,309,369	-		Psyr_2726	0.74	+1.2
3,309,369	-		Psyr_2726	0.74	-0.3
3,309,369	-		Psyr_2726	0.74	-0.7
3,309,369	-		Psyr_2726	0.74	+0.8
3,309,471	+		Psyr_2726	0.79	+0.8
3,309,471	+		Psyr_2726	0.79	-0.2
3,309,472	-		Psyr_2726	0.79	-0.2
3,309,511	+		Psyr_2726	0.81	+0.3
3,309,811	+				-0.1
3,309,812	-				-1.0
3,309,874	+				-2.4
3,310,128	-				+0.8
3,310,655	+		Psyr_2727	0.43	+0.8
3,310,655	+		Psyr_2727	0.43	-0.4
3,310,656	-		Psyr_2727	0.43	+0.6
3,310,656	-		Psyr_2727	0.43	+0.8
3,310,656	-		Psyr_2727	0.43	+0.8
3,310,789	+		Psyr_2727	0.52	+1.6
3,310,790	-		Psyr_2727	0.52	+0.9
3,310,790	-		Psyr_2727	0.52	+0.8
3,311,182	+		Psyr_2727	0.79	+2.8
3,311,182	+		Psyr_2727	0.79	-0.6
3,311,182	+		Psyr_2727	0.79	-0.6
3,311,182	+		Psyr_2727	0.79	-0.6
3,311,182	+		Psyr_2727	0.79	+0.6
3,311,182	+		Psyr_2727	0.79	-0.0
3,311,182	+		Psyr_2727	0.79	+0.3
3,311,183	-		Psyr_2727	0.79	+0.8
3,311,183	-		Psyr_2727	0.79	+1.3
3,311,427	+				-0.6
3,311,427	+				+0.2
3,311,427	+				-0.6
3,311,428	-				+1.0
3,311,428	-				+1.0
3,311,428	-				+0.8
3,311,499	-				+1.8
3,311,501	+				-1.1
3,311,501	+				-1.8
3,311,502	-				-1.2
3,311,502	-				-0.1
3,311,502	-				+1.8
3,311,502	-				+0.4
3,311,502	-				+1.1
3,311,517	+				-1.4
3,311,517	+				-1.0
3,311,517	+				-0.6
3,311,518	-				-1.9
3,311,518	-				-0.2
3,311,532	-				+1.4
3,311,559	+				+0.8
3,311,561	+				-0.4
3,311,561	+				+0.3
3,311,562	-				-1.0
3,311,672	+		Psyr_2728	0.15	-0.2
3,311,764	-		Psyr_2728	0.26	-2.1
3,311,873	+		Psyr_2728	0.39	+0.4
3,311,873	+		Psyr_2728	0.39	-2.2
3,311,873	+		Psyr_2728	0.39	-1.0
3,311,873	+		Psyr_2728	0.39	-1.0
3,311,873	+		Psyr_2728	0.39	-0.2
3,311,873	+		Psyr_2728	0.39	-0.6
3,311,874	-		Psyr_2728	0.39	+0.6
3,311,874	-		Psyr_2728	0.39	-1.2
3,311,874	-		Psyr_2728	0.39	-0.7
3,311,874	-		Psyr_2728	0.39	-0.8
3,311,874	-		Psyr_2728	0.39	+0.2
3,311,874	-		Psyr_2728	0.39	-0.8
3,311,874	-		Psyr_2728	0.39	-1.1
3,311,874	-		Psyr_2728	0.39	+0.2
3,311,874	-		Psyr_2728	0.39	-1.6
3,311,874	-		Psyr_2728	0.39	+1.0
3,311,876	+		Psyr_2728	0.39	+1.8
3,311,876	+		Psyr_2728	0.39	-1.4
3,311,877	-		Psyr_2728	0.39	-1.2
3,312,069	-		Psyr_2728	0.62	+0.8
3,312,076	+		Psyr_2728	0.63	+0.8
3,312,159	-		Psyr_2728	0.73	-0.8
3,312,327	+				-1.4
3,312,328	-				+0.8
3,312,328	-				+1.8
3,312,328	-				+1.8
3,312,371	+				-0.2
3,312,371	+				-0.6
3,312,371	+				-0.4
3,312,371	+				-0.6
3,312,372	-				+1.0
3,312,372	-				-1.7
3,312,372	-				-0.6
3,312,372	-				-0.2
3,312,372	-				-0.2
3,312,423	+				-1.0
3,312,424	-				+0.2
3,312,424	-				+0.0