Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2704

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
3,284,482	-		Psyr_2703	0.56	-0.2
3,284,499	-		Psyr_2703	0.57	-0.6
3,284,650	+		Psyr_2703	0.70	-1.1
3,284,700	+		Psyr_2703	0.74	+0.1
3,284,852	-		Psyr_2703	0.87	+0.2
3,284,931	+				+1.8
3,284,931	+				-0.4
3,285,002	+				-1.2
3,285,002	+				+0.4
3,285,003	-				+0.8
3,285,020	+				-0.1
3,285,021	-				+0.1
3,285,109	+				-1.7
3,285,109	+				-0.3
3,285,109	+				-0.3
3,285,110	-				-0.5
3,285,110	-				-0.1
3,285,110	-				+0.3
3,285,110	-				-2.1
3,285,110	-				-1.2
3,285,110	-				+0.2
3,285,141	+				-0.2
3,285,141	+				-0.1
3,285,142	-				+2.3
3,285,142	-				-0.6
3,285,142	-				+6.5
3,285,142	-				-1.4
3,285,142	-				+0.3
3,285,245	+				-0.2
3,285,245	+				-0.2
3,285,287	+				+2.2
3,285,288	-				-1.2
3,285,449	+				-1.4
3,285,450	-				-0.8
3,285,450	-				+1.2
3,285,511	+				+0.8
3,285,550	-		Psyr_2704	0.12	-1.6
3,285,705	-		Psyr_2704	0.28	+0.2
3,285,864	-		Psyr_2704	0.43	+1.2
3,285,948	-		Psyr_2704	0.51	+1.8
3,286,051	-		Psyr_2704	0.61	+0.3
3,286,068	+		Psyr_2704	0.63	+0.9
3,286,068	+		Psyr_2704	0.63	-0.4
3,286,069	-		Psyr_2704	0.63	+0.4
3,286,069	-		Psyr_2704	0.63	-0.4
3,286,115	+		Psyr_2704	0.67	-0.6
3,286,115	+		Psyr_2704	0.67	+0.2
3,286,116	-		Psyr_2704	0.67	-2.2
3,286,252	+		Psyr_2704	0.81	+0.2
3,286,252	+		Psyr_2704	0.81	+1.8
3,286,252	+		Psyr_2704	0.81	-1.3
3,286,253	-		Psyr_2704	0.81	+1.4
3,286,253	-		Psyr_2704	0.81	-1.7
3,286,253	-		Psyr_2704	0.81	-0.2
3,286,525	+				-0.9
3,286,525	+				-1.2
3,286,525	+				+0.8
3,286,525	+				+0.4
3,286,526	-				+1.2
3,286,526	-				-1.2
3,286,612	+		Psyr_2705	0.14	-1.8
3,286,612	+		Psyr_2705	0.14	+0.2
3,286,612	+		Psyr_2705	0.14	-0.3
3,286,615	+		Psyr_2705	0.15	+2.3
3,286,747	+		Psyr_2705	0.36	-1.8
3,286,748	-		Psyr_2705	0.37	-0.2
3,286,855	+		Psyr_2705	0.54	-1.2
3,286,855	+		Psyr_2705	0.54	-2.6
3,286,855	+		Psyr_2705	0.54	-0.7
3,286,855	+		Psyr_2705	0.54	+0.4
3,286,855	+				-0.8
3,286,855	+		Psyr_2705	0.54	-0.7
3,286,856	-		Psyr_2705	0.54	-0.6
3,286,856	-		Psyr_2705	0.54	-0.0
3,286,856	-		Psyr_2705	0.54	+0.0
3,287,032	+		Psyr_2705	0.83	-0.8
3,287,032	+		Psyr_2705	0.83	+0.4
3,287,032	+		Psyr_2705	0.83	-1.7
3,287,032	+		Psyr_2705	0.83	-1.3
3,287,032	+		Psyr_2705	0.83	-0.6
3,287,033	-		Psyr_2705	0.83	+1.0
3,287,081	+				-1.1
3,287,081	+				+1.0
3,287,081	+				+0.8
3,287,082	-				-0.4
3,287,082	-				+0.0
3,287,082	-				+1.8
3,287,161	+				-0.6
3,287,161	+				-1.2
3,287,162	-				+1.8
3,287,219	+				-0.6
3,287,219	+				+0.4
3,287,219	+				+0.2
3,287,220	-				-0.1