Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2697

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
3,272,955	+		Psyr_2696	0.36	-0.8
3,272,956	-		Psyr_2696	0.37	+1.2
3,273,007	+		Psyr_2696	0.40	-0.1
3,273,007	+		Psyr_2696	0.40	-1.3
3,273,008	-		Psyr_2696	0.40	+1.0
3,273,076	+		Psyr_2696	0.45	+0.4
3,273,374	-		Psyr_2696	0.67	-0.8
3,273,540	+		Psyr_2696	0.78	-0.7
3,273,540	+		Psyr_2696	0.78	+0.2
3,273,540	+		Psyr_2696	0.78	-0.2
3,273,541	-		Psyr_2696	0.78	-1.5
3,273,541	-		Psyr_2696	0.78	-0.3
3,273,541	-		Psyr_2696	0.78	+0.4
3,273,541	-		Psyr_2696	0.78	-0.2
3,273,544	+		Psyr_2696	0.79	+0.0
3,273,544	+		Psyr_2696	0.79	-1.6
3,273,544	+		Psyr_2696	0.79	-0.4
3,273,544	+				+1.8
3,273,745	+				-0.0
3,273,746	-				-0.8
3,273,898	+				-0.0
3,273,898	+				-0.6
3,273,898	+				+2.5
3,273,899	-				+0.4
3,273,899	-				-1.7
3,273,899	-				-0.1
3,273,901	+				+1.3
3,273,901	+				+0.2
3,273,901	+				-0.4
3,273,902	-				-1.0
3,273,905	+				+0.3
3,273,906	-				+0.5
3,273,906	-				-0.2
3,274,046	+		Psyr_2697	0.12	-0.9
3,274,047	-		Psyr_2697	0.13	-0.7
3,274,054	+		Psyr_2697	0.13	+0.2
3,274,054	+		Psyr_2697	0.13	+0.2
3,274,055	-		Psyr_2697	0.13	-0.6
3,274,055	-		Psyr_2697	0.13	-0.4
3,274,204	+		Psyr_2697	0.23	-0.3
3,274,370	-		Psyr_2697	0.34	-0.1
3,274,370	-		Psyr_2697	0.34	-2.7
3,274,489	+		Psyr_2697	0.42	+0.8
3,274,489	+		Psyr_2697	0.42	-0.0
3,274,490	-		Psyr_2697	0.42	-1.7
3,274,537	+		Psyr_2697	0.46	-0.6
3,274,540	+		Psyr_2697	0.46	-0.2
3,274,541	-		Psyr_2697	0.46	-2.6
3,274,541	-		Psyr_2697	0.46	-1.8
3,274,647	+		Psyr_2697	0.53	+1.8
3,274,648	-		Psyr_2697	0.53	+0.5
3,274,648	-		Psyr_2697	0.53	+1.2
3,274,662	+		Psyr_2697	0.54	+0.8
3,274,834	-		Psyr_2697	0.66	-0.8
3,275,047	+		Psyr_2697	0.80	-1.7
3,275,047	+		Psyr_2697	0.80	-0.2
3,275,348	+				-0.2
3,275,348	+				-0.2
3,275,348	+				+0.1
3,275,348	+				-0.4
3,275,349	-				+0.1
3,275,349	-				+0.5
3,275,349	-				+0.9
3,275,401	+				+0.2
3,275,401	+				+1.6
3,275,401	+				+0.8
3,275,402	-				+0.8
3,275,402	-				+0.3
3,275,402	-				+1.8
3,275,402	-				-0.6
3,275,403	+				-0.2
3,275,403	+				-0.2
3,275,403	+				+1.4
3,275,403	+				+0.4
3,275,404	-				+1.8
3,275,404	-				+0.3
3,275,404	-				-2.6
3,275,404	-				-0.6
3,275,404	-				-2.2
3,275,404	-				+1.5
3,275,404	-				-1.2
3,275,404	-				-2.5
3,275,404	-				+1.3
3,275,571	+				+0.3
3,275,571	+				-0.6
3,275,598	+				-0.2
3,275,599	-				+1.3
3,275,605	-				+0.5
3,275,605	-				-0.6
3,275,694	+				+0.8
3,275,695	-				-1.4
3,275,696	+				+0.6
3,275,780	+				+0.8
3,275,781	-				+0.8
3,275,781	-				-1.0
3,275,781	-				-1.8
3,275,899	-				-0.8
3,275,899	-				+1.8
3,275,899	-				-0.8
3,275,975	+				-1.0
3,276,084	-		Psyr_2698	0.14	-0.6
3,276,139	+		Psyr_2698	0.16	-0.0
3,276,140	-		Psyr_2698	0.16	+1.0
3,276,143	+		Psyr_2698	0.16	+1.2
3,276,143	+		Psyr_2698	0.16	-0.0
3,276,144	-		Psyr_2698	0.16	+1.5
3,276,144	-		Psyr_2698	0.16	+1.8
3,276,156	+		Psyr_2698	0.17	+0.8
3,276,167	-		Psyr_2698	0.17	-0.6
3,276,170	+		Psyr_2698	0.17	-1.2
3,276,170	+		Psyr_2698	0.17	-1.4
3,276,201	+		Psyr_2698	0.18	+1.8
3,276,202	-		Psyr_2698	0.18	+0.2
3,276,271	+		Psyr_2698	0.21	-1.9
3,276,328	-		Psyr_2698	0.24	+0.4