Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2583

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
3,025,386	+		Psyr_2582	0.77	-1.8
3,025,387	-		Psyr_2582	0.77	-1.4
3,025,387	-		Psyr_2582	0.77	+0.2
3,025,420	+		Psyr_2582	0.78	-0.8
3,025,443	+		Psyr_2582	0.79	+0.5
3,025,469	-		Psyr_2582	0.80	-1.2
3,025,563	+		Psyr_2582	0.84	+1.8
3,025,563	+		Psyr_2582	0.84	+0.8
3,025,563	+		Psyr_2582	0.84	-0.4
3,025,564	-		Psyr_2582	0.84	-0.3
3,025,564	-		Psyr_2582	0.84	-1.7
3,025,564	-		Psyr_2582	0.84	-0.8
3,025,564	-		Psyr_2582	0.84	-0.2
3,025,635	+		Psyr_2582	0.87	-0.4
3,025,635	+		Psyr_2582	0.87	-0.5
3,025,635	+		Psyr_2582	0.87	-0.8
3,025,636	-		Psyr_2582	0.87	-0.2
3,025,636	-		Psyr_2582	0.87	-0.4
3,025,636	-		Psyr_2582	0.87	+2.4
3,025,707	+		Psyr_2582	0.90	-0.3
3,025,708	-		Psyr_2582	0.90	-2.3
3,025,723	-				-0.8
3,025,774	+				-0.4
3,025,793	+				+0.4
3,025,793	+				-1.0
3,025,851	+				+0.7
3,025,851	+				-0.5
3,025,852	-				-1.5
3,025,852	-				+0.0
3,025,852	-				-0.0
3,025,852	-				-0.3
3,025,852	-				+0.4
3,025,852	-				+0.5
3,025,852	-				-1.5
3,025,854	+				+1.8
3,025,920	+				+0.5
3,025,920	+				-0.0
3,025,920	+				+2.5
3,025,921	-				-1.4
3,025,921	-				+0.5
3,025,921	-				-0.7
3,025,921	-				-1.7
3,025,921	-				+0.6
3,025,983	+				-1.7
3,025,983	+				-2.0
3,025,983	+				-0.2
3,025,983	+				-0.8
3,025,983	+				+1.8
3,025,984	-				-1.7
3,025,984	-				+0.4
3,025,984	-				-0.5
3,025,984	-				+1.9
3,025,984	-				+0.6
3,025,984	-				+0.0
3,025,984	-				+0.4
3,025,984	-				+2.8
3,025,984	-				+0.5
3,025,984	-				+0.8
3,025,985	+				-0.8
3,025,985	+				+0.8
3,025,985	+				+1.8
3,025,985	+				-1.4
3,025,986	-				-0.1
3,025,987	+				+0.2
3,025,987	+				-1.5
3,026,032	+				-0.2
3,026,035	+				-2.5
3,026,035	+				+1.0
3,026,036	-				-1.9
3,026,166	+				-0.0
3,026,167	-				-1.3
3,026,167	-				-0.2
3,026,326	+				+0.7
3,026,327	-				-2.7
3,026,329	+				-1.5
3,026,329	+				-0.2
3,026,330	-				-0.8
3,026,330	-				+0.5
3,026,330	-				-0.8
3,026,354	+				-0.7
3,026,354	+				-0.4
3,026,354	+				+0.8
3,026,389	-				-2.5
3,026,389	-				-2.3
3,026,397	-				+0.2
3,026,469	-		Psyr_2583	0.12	-0.8
3,026,652	-		Psyr_2583	0.26	+0.1
3,026,867	+		Psyr_2583	0.41	+0.6
3,026,868	-		Psyr_2583	0.41	-0.1
3,026,868	-		Psyr_2583	0.41	+3.1
3,026,918	+		Psyr_2583	0.45	+0.5
3,026,919	-		Psyr_2583	0.45	+0.9
3,026,921	+		Psyr_2583	0.45	+0.7
3,026,921	+		Psyr_2583	0.45	+1.2
3,026,921	+		Psyr_2583	0.45	+1.2
3,026,922	-		Psyr_2583	0.45	-1.5
3,026,922	-		Psyr_2583	0.45	-0.1
3,027,541	-				-1.4
3,027,666	+				+2.1
3,027,682	-				-2.1
3,027,685	+				-0.8
3,027,685	+				+0.2
3,027,685	+				+1.1
3,027,686	-				-0.5
3,027,686	-				-2.6
3,027,689	-				+0.8
3,027,689	-				-0.2
3,027,838	+				-0.8
3,027,879	-				-0.5
3,027,987	+				+0.8
3,027,987	+				+0.8
3,027,987	+				+0.2