Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2556

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
2,968,214	+		Psyr_2554	0.59	+1.4
2,968,214	+		Psyr_2554	0.59	+0.2
2,968,215	-		Psyr_2554	0.59	-0.6
2,968,215	-		Psyr_2554	0.59	+0.6
2,968,215	-		Psyr_2554	0.59	+2.1
2,968,215	-		Psyr_2554	0.59	+1.2
2,968,272	-		Psyr_2554	0.64	-0.2
2,968,470	-		Psyr_2554	0.84	+1.3
2,968,545	-				+0.2
2,968,580	+				+0.4
2,968,580	+				+0.3
2,968,580	+				+1.8
2,968,581	-				-0.4
2,968,660	+				+1.2
2,968,817	+		Psyr_2555	0.35	-0.8
2,968,818	-		Psyr_2555	0.35	+1.2
2,968,858	-		Psyr_2555	0.43	-1.4
2,969,104	-				-0.7
2,969,157	+				-0.2
2,969,247	-		Psyr_2556	0.14	+2.0
2,969,247	-		Psyr_2556	0.14	+1.8
2,969,372	+		Psyr_2556	0.32	+0.9
2,969,373	-		Psyr_2556	0.33	+0.8
2,969,388	+		Psyr_2556	0.35	+1.2
2,969,389	-		Psyr_2556	0.35	+0.2
2,969,419	+		Psyr_2556	0.39	+0.2
2,969,419	+		Psyr_2556	0.39	+0.3
2,969,420	-		Psyr_2556	0.40	-0.2
2,969,420	-		Psyr_2556	0.40	-0.6
2,969,423	+		Psyr_2556	0.40	-0.4
2,969,606	+		Psyr_2556	0.67	-1.4
2,969,721	+		Psyr_2556	0.84	-0.2
2,969,829	+				-1.4
2,969,829	+				+0.1
2,969,829	+				+0.2
2,969,830	-				-0.6
2,970,672	+		Psyr_2557	0.45	-1.4
2,970,729	+		Psyr_2557	0.48	+0.2