Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2450

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
2,836,273	+		Psyr_2448	0.80	+1.3
2,836,273	+		Psyr_2448	0.80	-1.9
2,836,273	+		Psyr_2448	0.80	-2.3
2,836,274	-		Psyr_2448	0.80	-1.5
2,836,274	-		Psyr_2448	0.80	-0.2
2,836,317	+		Psyr_2448	0.84	-0.2
2,836,492	-				-1.7
2,836,492	-				-1.8
2,836,536	-				-0.9
2,836,586	+				-0.4
2,836,586	+				+0.6
2,836,587	-				-1.4
2,836,587	-				-0.4
2,836,587	-				+0.1
2,836,587	-				-1.2
2,836,587	-				-2.6
2,836,587	-				-0.9
2,836,590	+				-0.1
2,836,591	-				-0.6
2,836,591	-				-1.8
2,836,592	+				-0.7
2,836,640	-		Psyr_2449	0.19	-1.8
2,836,683	+		Psyr_2449	0.29	+3.0
2,836,683	+		Psyr_2449	0.29	+1.1
2,836,683	+		Psyr_2449	0.29	-3.3
2,836,684	-		Psyr_2449	0.29	-1.0
2,836,684	-		Psyr_2449	0.29	-1.1
2,836,992	+				+0.6
2,836,993	-				+0.4
2,836,993	-				+1.1
2,837,245	+				+0.6
2,837,245	+				-0.4
2,837,245	+				-0.2
2,837,246	-				-0.2
2,837,260	+		Psyr_2450	0.11	-1.2
2,837,260	+		Psyr_2450	0.11	+0.6
2,837,261	-		Psyr_2450	0.11	+1.3
2,837,261	-		Psyr_2450	0.11	+0.4
2,837,489	-		Psyr_2450	0.22	+0.6
2,837,556	-		Psyr_2450	0.25	-0.8
2,837,556	-		Psyr_2450	0.25	-0.0
2,837,556	-		Psyr_2450	0.25	-0.4
2,837,681	+		Psyr_2450	0.31	+0.6
2,837,681	+		Psyr_2450	0.31	+0.5
2,837,681	+		Psyr_2450	0.31	+0.7
2,837,681	+		Psyr_2450	0.31	-0.5
2,837,681	+		Psyr_2450	0.31	+0.3
2,837,681	+		Psyr_2450	0.31	+0.4
2,837,682	-		Psyr_2450	0.31	-0.8
2,838,355	+		Psyr_2450	0.65	+0.1
2,838,356	-		Psyr_2450	0.65	-1.2
2,838,356	-		Psyr_2450	0.65	+0.4
2,838,356	-		Psyr_2450	0.65	+0.1
2,838,393	+		Psyr_2450	0.66	-0.5
2,838,668	+		Psyr_2450	0.80	+0.1
2,838,876	+				-0.1
2,838,876	+				-1.9
2,838,876	+				+1.6
2,838,876	+				+0.1
2,838,876	+				-1.1
2,838,877	-				+0.2
2,839,069	-				-1.2
2,839,114	+				-1.4
2,839,114	+				+1.3
2,839,115	-				-0.1
2,839,115	-				-0.4
2,839,115	-				+0.1
2,839,115	-				+0.1
2,839,115	-				-0.2
2,839,193	-				+0.2
2,839,255	-		Psyr_2451	0.12	+3.1
2,839,306	+		Psyr_2451	0.16	-1.2
2,839,306	+		Psyr_2451	0.16	+0.1
2,839,306	+		Psyr_2451	0.16	-1.4
2,839,306	+		Psyr_2451	0.16	-0.4
2,839,307	-		Psyr_2451	0.16	-0.5
2,839,311	-		Psyr_2451	0.16	+0.4
2,839,311	-		Psyr_2451	0.16	+1.6
2,839,311	-		Psyr_2451	0.16	+2.1
2,839,311	-		Psyr_2451	0.16	-1.2
2,839,394	-		Psyr_2451	0.22	+1.9
2,839,394	-		Psyr_2451	0.22	-0.4
2,839,454	-		Psyr_2451	0.26	+1.0
2,839,497	-		Psyr_2451	0.29	+0.6
2,839,654	-		Psyr_2451	0.39	-0.1
2,839,828	+		Psyr_2451	0.51	-0.1
2,839,930	+		Psyr_2451	0.58	+0.9
2,839,931	-		Psyr_2451	0.58	+0.3
2,839,966	+		Psyr_2451	0.60	+1.1
2,839,966	+		Psyr_2451	0.60	+2.2
2,839,966	+		Psyr_2451	0.60	+0.4
2,839,967	-		Psyr_2451	0.60	-1.7
2,839,970	+		Psyr_2451	0.61	-0.1
2,839,970	+		Psyr_2451	0.61	-0.4
2,839,970	+		Psyr_2451	0.61	+0.2
2,839,971	-		Psyr_2451	0.61	-2.0
2,839,994	+		Psyr_2451	0.62	+0.9