Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2443

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
2,827,356	-				+1.9
2,827,356	-				-0.4
2,827,422	+				+0.0
2,827,423	-				-0.7
2,827,423	-				-1.0
2,827,462	+				+1.6
2,827,660	-		Psyr_2442	0.15	+1.0
2,827,707	+		Psyr_2442	0.21	-0.7
2,827,707	+		Psyr_2442	0.21	-0.7
2,827,707	+		Psyr_2442	0.21	+0.0
2,827,709	+		Psyr_2442	0.21	-0.4
2,827,709	+		Psyr_2442	0.21	-0.5
2,827,709	+		Psyr_2442	0.21	+1.9
2,827,709	+		Psyr_2442	0.21	-0.5
2,827,710	-		Psyr_2442	0.21	-1.2
2,827,710	-		Psyr_2442	0.21	+2.0
2,827,896	+		Psyr_2442	0.46	-0.4
2,827,904	+		Psyr_2442	0.47	-1.2
2,827,905	-		Psyr_2442	0.47	+0.5
2,827,905	-		Psyr_2442	0.47	-0.2
2,828,136	-		Psyr_2442	0.77	-0.4
2,828,157	+		Psyr_2442	0.80	-0.1
2,828,158	-		Psyr_2442	0.80	+1.6
2,828,158	-		Psyr_2442	0.80	+0.0
2,828,158	-		Psyr_2442	0.80	+1.0
2,828,158	-		Psyr_2442	0.80	+0.0
2,828,169	+		Psyr_2442	0.82	+1.0
2,828,280	-				+0.9
2,828,283	+				+1.6
2,828,283	+				-0.8
2,828,283	+				-1.2
2,828,283	+				-0.7
2,828,283	+				+1.6
2,828,283	+				-0.7
2,828,283	+				+1.6
2,828,283	+				-0.1
2,828,283	+				+0.6
2,828,284	-				+0.6
2,828,284	-				-0.7
2,828,284	-				-1.2
2,828,284	-				-0.2
2,828,358	+				+0.7
2,828,358	+				-0.4
2,828,358	+				-0.7
2,828,358	+				-1.0
2,828,358	+				-0.7
2,828,358	+				+0.6
2,828,358	+				-0.7
2,828,358	+				+0.0
2,828,359	-				+0.6
2,828,359	-				+0.2
2,828,359	-				+0.7
2,828,359	-				-0.1
2,828,359	-				+0.1
2,828,359	-				+0.0
2,828,828	-		Psyr_2443	0.43	+0.6
2,828,828	-		Psyr_2443	0.43	+0.8
2,828,829	+		Psyr_2443	0.43	+0.4
2,828,829	+		Psyr_2443	0.43	+0.4
2,828,839	-		Psyr_2443	0.44	-1.2
2,828,846	+		Psyr_2443	0.44	+0.5
2,828,847	-		Psyr_2443	0.44	+0.4
2,829,103	-		Psyr_2443	0.65	+0.3
2,829,381	-		Psyr_2443	0.88	-0.3
2,829,381	-		Psyr_2443	0.88	-0.6
2,829,526	+				-0.4
2,829,526	+				-0.2
2,829,526	+				+0.0
2,829,527	-				+1.4
2,829,527	-				+0.9
2,829,527	-				+1.8
2,829,527	-				+1.0
2,829,563	+				-1.7
2,829,564	-				+0.2
2,829,564	-				-0.7
2,829,567	+				-1.2
2,829,568	-				+0.5
2,829,581	+				-0.3
2,829,582	-				-1.3
2,829,582	-				+0.7
2,829,888	-		Psyr_2444	0.69	-0.7
2,829,888	-		Psyr_2444	0.69	-1.2
2,829,913	+		Psyr_2444	0.76	+0.6
2,829,914	-		Psyr_2444	0.76	+0.0
2,830,127	+				-1.7
2,830,128	-				+0.0
2,830,165	+				+0.6
2,830,165	+				-0.1
2,830,165	+				+1.0
2,830,170	+				+1.6
2,830,236	+				+0.3
2,830,236	+				+1.0
2,830,236	+				+2.4
2,830,237	-				-0.5
2,830,237	-				-0.7
2,830,237	-				-1.0
2,830,270	-				+0.7
2,830,270	-				+0.6
2,830,328	+				+0.6
2,830,387	+				-0.6
2,830,387	+				-1.4
2,830,416	+				+0.0
2,830,417	-				-2.2
2,830,451	+				+1.1
2,830,451	+				+0.6
2,830,451	+				+0.4
2,830,451	+				+1.6
2,830,452	-				+0.5
2,830,452	-				+0.4
2,830,452	-				-0.4
2,830,467	+				+0.6
2,830,467	+				+1.6