Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2440

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
2,824,004	-				+0.8
2,824,070	+		Psyr_2439	0.14	+0.9
2,824,070	+		Psyr_2439	0.14	+2.6
2,824,070	+		Psyr_2439	0.14	-0.8
2,824,070	+		Psyr_2439	0.14	-0.2
2,824,070	+		Psyr_2439	0.14	+2.2
2,824,070	+		Psyr_2439	0.14	+0.5
2,824,071	-		Psyr_2439	0.14	+0.0
2,824,071	-		Psyr_2439	0.14	-1.5
2,824,071	-		Psyr_2439	0.14	-0.8
2,824,071	-		Psyr_2439	0.14	+1.4
2,824,071	-		Psyr_2439	0.14	-1.2
2,824,703	+		Psyr_2439	0.82	+0.2
2,824,721	+		Psyr_2439	0.84	+0.2
2,824,721	+		Psyr_2439	0.84	-1.1
2,824,721	+		Psyr_2439	0.84	-0.2
2,824,721	+		Psyr_2439	0.84	-0.3
2,824,722	-		Psyr_2439	0.84	+0.2
2,824,722	-		Psyr_2439	0.84	-1.0
2,824,866	+				+1.3
2,824,866	+				+0.8
2,824,962	-				-1.0
2,825,047	+				-1.2
2,825,048	-				+1.2
2,825,048	-				-1.1
2,825,048	-				-0.7
2,825,048	-				+0.9
2,825,048	-				-1.5
2,825,130	-		Psyr_2440	0.13	-1.5
2,825,130	-		Psyr_2440	0.13	+2.6
2,825,130	-		Psyr_2440	0.13	-0.2
2,825,130	-		Psyr_2440	0.13	+0.2
2,825,217	-		Psyr_2440	0.19	+0.0
2,825,228	+		Psyr_2440	0.20	-0.8
2,825,228	+		Psyr_2440	0.20	-0.7
2,825,229	-		Psyr_2440	0.20	+1.6
2,825,229	-		Psyr_2440	0.20	+0.3
2,825,229	-		Psyr_2440	0.20	-0.4
2,825,229	-		Psyr_2440	0.20	+0.2
2,825,229	-		Psyr_2440	0.20	+0.6
2,825,229	-		Psyr_2440	0.20	-1.2
2,825,378	+		Psyr_2440	0.32	+0.0
2,825,421	-		Psyr_2440	0.35	-0.2
2,825,421	-		Psyr_2440	0.35	-0.6
2,825,421	-		Psyr_2440	0.35	-1.2
2,825,421	-		Psyr_2440	0.35	+0.2
2,825,587	-		Psyr_2440	0.47	+2.2
2,825,595	-		Psyr_2440	0.48	-1.0
2,825,595	-		Psyr_2440	0.48	+0.9
2,825,595	-		Psyr_2440	0.48	-0.7
2,825,669	+		Psyr_2440	0.54	-0.9
2,825,741	+		Psyr_2440	0.59	-0.2
2,825,799	+		Psyr_2440	0.63	+1.2
2,825,852	+		Psyr_2440	0.67	-0.4
2,825,852	+		Psyr_2440	0.67	-0.5
2,825,852	+		Psyr_2440	0.67	+1.0
2,825,852	+		Psyr_2440	0.67	-1.0
2,825,853	-		Psyr_2440	0.67	-0.7
2,825,874	-		Psyr_2440	0.69	-1.7
2,825,874	-		Psyr_2440	0.69	-2.6
2,825,874	-		Psyr_2440	0.69	+0.3
2,825,921	-		Psyr_2440	0.73	+0.1
2,825,948	+		Psyr_2440	0.75	+1.2
2,825,948	+		Psyr_2440	0.75	+0.9
2,825,949	-		Psyr_2440	0.75	-0.2
2,825,949	-		Psyr_2440	0.75	-1.2
2,826,011	+		Psyr_2440	0.79	-0.1
2,826,011	+		Psyr_2440	0.79	+1.6
2,826,011	+		Psyr_2440	0.79	-0.7
2,826,011	+		Psyr_2440	0.79	-1.2
2,826,011	+		Psyr_2440	0.79	+0.0
2,826,011	+		Psyr_2440	0.79	-1.0
2,826,011	+		Psyr_2440	0.79	-2.1
2,826,011	+		Psyr_2440	0.79	+0.4
2,826,012	-		Psyr_2440	0.80	+1.6
2,826,012	-		Psyr_2440	0.80	-0.7
2,826,012	-		Psyr_2440	0.80	-0.7
2,826,012	-		Psyr_2440	0.80	+1.6
2,826,012	-		Psyr_2440	0.80	-2.5
2,826,012	-		Psyr_2440	0.80	-0.4
2,826,012	-		Psyr_2440	0.80	-1.0
2,826,326	+				-0.7
2,826,370	+				+1.1
2,826,370	+				+0.4
2,826,371	-				+0.6
2,826,625	-		Psyr_2441	0.11	-0.4
2,826,703	-		Psyr_2441	0.19	-0.7
2,826,767	+		Psyr_2441	0.26	-0.2
2,826,768	-		Psyr_2441	0.27	-0.4
2,826,837	+		Psyr_2441	0.34	-0.2
2,826,838	-		Psyr_2441	0.34	+0.0
2,827,194	+		Psyr_2441	0.73	-0.4
2,827,194	+		Psyr_2441	0.73	+0.6
2,827,194	+		Psyr_2441	0.73	-0.8
2,827,250	+		Psyr_2441	0.79	+0.4
2,827,250	+		Psyr_2441	0.79	+0.5