Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2304

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
2,677,640	+		Psyr_2303	0.81	+0.3
2,677,641	-		Psyr_2303	0.81	-2.1
2,677,666	+		Psyr_2303	0.83	+0.6
2,677,666	+		Psyr_2303	0.83	-1.9
2,677,666	+		Psyr_2303	0.83	+0.6
2,677,667	-		Psyr_2303	0.83	+1.6
2,677,667	-		Psyr_2303	0.83	-0.0
2,677,803	-				-0.5
2,677,874	+				-1.4
2,677,875	-				+1.6
2,677,875	-				+1.3
2,677,875	-				+0.4
2,677,875	-				+2.4
2,677,875	-				-0.0
2,677,875	-				+1.0
2,677,914	+				-0.7
2,677,914	+				-1.2
2,677,914	+				+0.3
2,677,914	+				+2.8
2,677,914	+				+0.3
2,678,056	+				+0.2
2,678,057	-				+0.3
2,678,299	+				+0.6
2,678,299	+				-0.9
2,678,299	+				-0.7
2,678,299	+				+0.3
2,678,299	+				+0.4
2,678,299	+				+1.2
2,678,299	+				-0.3
2,678,299	+				-0.1
2,678,301	+				+0.3
2,678,301	+				-0.2
2,678,301	+				+0.6
2,678,301	+				-0.5
2,678,302	-				-0.4
2,678,302	-				+1.6
2,678,302	-				+0.6
2,678,398	+				+0.7
2,678,399	-				+0.4
2,678,399	-				-1.2
2,678,400	+				+0.8
2,679,021	-		Psyr_2304	0.31	+2.0
2,679,021	-		Psyr_2304	0.31	-1.1
2,679,160	+		Psyr_2304	0.41	+0.7
2,679,161	-		Psyr_2304	0.41	+0.8
2,679,254	+		Psyr_2304	0.47	+0.5
2,679,254	+		Psyr_2304	0.47	+0.8
2,679,510	+		Psyr_2304	0.65	+2.6
2,679,538	+		Psyr_2304	0.67	+0.4
2,679,538	+		Psyr_2304	0.67	-1.1
2,679,538	+		Psyr_2304	0.67	+0.2
2,679,538	+		Psyr_2304	0.67	+1.8
2,679,538	+		Psyr_2304	0.67	+1.2
2,679,539	-		Psyr_2304	0.67	-0.4
2,679,539	-		Psyr_2304	0.67	+0.2
2,679,539	-		Psyr_2304	0.67	-0.6
2,679,539	-		Psyr_2304	0.67	-0.6
2,679,539	-		Psyr_2304	0.67	+0.6
2,679,835	+		Psyr_2304	0.88	+0.6
2,679,835	+				+1.6
2,679,835	+		Psyr_2304	0.88	-1.3
2,679,836	-		Psyr_2304	0.88	-1.4
2,679,836	-		Psyr_2304	0.88	+0.3
2,679,836	-		Psyr_2304	0.88	-0.3
2,679,856	+		Psyr_2304	0.90	+1.3
2,679,856	+		Psyr_2304	0.90	+0.7
2,679,857	-		Psyr_2304	0.90	+0.6
2,679,946	+				-1.6
2,679,946	+				+0.8
2,679,946	+				+1.6
2,679,946	+				+0.8
2,679,946	+				-0.5
2,679,946	+				+0.4
2,679,946	+				-0.1
2,679,946	+				+1.6
2,679,946	+				-1.0
2,679,946	+				+0.3
2,679,946	+				+1.6
2,679,947	-				-0.0
2,679,947	-				+1.6
2,679,947	-				+0.4
2,679,947	-				+0.6
2,680,209	-				-1.7
2,680,245	+				-0.5
2,680,245	+				+1.0
2,680,245	+				+1.6
2,680,245	+				+0.6
2,680,246	-				-1.6
2,680,246	-				-1.6
2,680,282	-				-1.0
2,680,282	-				+0.6
2,680,285	+				+0.8
2,680,285	+				+0.1
2,680,286	-				-2.2
2,680,286	-				-0.0
2,680,286	-				+1.6
2,680,286	-				+1.6
2,680,286	-				-2.7
2,680,286	-				-2.3
2,680,311	+				+0.3
2,680,312	-				+0.6
2,680,325	+				-0.4
2,680,448	+		Psyr_2305	0.11	+1.2
2,680,448	+		Psyr_2305	0.11	+1.6
2,680,822	+		Psyr_2305	0.39	-0.6
2,680,823	-		Psyr_2305	0.39	-1.0
2,680,823	-		Psyr_2305	0.39	+1.6
2,680,950	+		Psyr_2305	0.49	+1.2
2,680,950	+		Psyr_2305	0.49	-0.4
2,680,950	+		Psyr_2305	0.49	+0.6
2,680,950	+		Psyr_2305	0.49	-0.3
2,680,951	-		Psyr_2305	0.49	-1.0
2,680,992	-		Psyr_2305	0.52	-0.2
2,680,998	+		Psyr_2305	0.53	+1.0
2,680,998	+		Psyr_2305	0.53	+0.6