Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2299

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
2,671,101	+		Psyr_2298	0.56	-0.4
2,671,102	-		Psyr_2298	0.56	+1.1
2,671,106	-		Psyr_2298	0.56	+0.7
2,671,122	-		Psyr_2298	0.57	+2.9
2,671,122	-		Psyr_2298	0.57	-0.5
2,671,122	-		Psyr_2298	0.57	+0.2
2,671,145	+		Psyr_2298	0.58	+0.4
2,671,170	-		Psyr_2298	0.60	-0.8
2,671,170	-		Psyr_2298	0.60	-0.2
2,671,185	-		Psyr_2298	0.60	+0.6
2,671,238	+		Psyr_2298	0.63	-0.3
2,671,238	+		Psyr_2298	0.63	-2.0
2,671,239	-		Psyr_2298	0.63	+0.8
2,671,522	-		Psyr_2298	0.79	+0.2
2,671,522	-		Psyr_2298	0.79	-2.0
2,671,772	+				-0.2
2,671,772	+				+0.8
2,671,773	-				+1.6
2,671,813	+				+2.3
2,672,033	+				+1.1
2,672,051	+				-0.8
2,672,210	+		Psyr_2299	0.17	-1.0
2,672,249	+		Psyr_2299	0.20	-1.6
2,672,265	-		Psyr_2299	0.21	-0.8
2,672,339	+		Psyr_2299	0.26	+0.6
2,672,340	-		Psyr_2299	0.26	-2.7
2,672,340	-		Psyr_2299	0.26	+0.6
2,672,419	-		Psyr_2299	0.32	-1.1
2,672,540	-		Psyr_2299	0.40	-0.9
2,672,711	+		Psyr_2299	0.52	-0.0
2,672,712	-		Psyr_2299	0.52	+1.4
2,672,712	-		Psyr_2299	0.52	+0.2
2,672,816	-		Psyr_2299	0.60	+0.8
2,672,816	-		Psyr_2299	0.60	-0.4
2,672,849	+		Psyr_2299	0.62	-0.4
2,672,849	+		Psyr_2299	0.62	-0.0
2,672,909	-		Psyr_2299	0.66	+2.6
2,672,963	+		Psyr_2299	0.70	-1.8
2,672,972	+		Psyr_2299	0.71	+0.6
2,673,005	+		Psyr_2299	0.73	-0.8
2,673,005	+		Psyr_2299	0.73	-0.1
2,673,005	+		Psyr_2299	0.73	-1.2
2,673,196	-		Psyr_2299	0.86	-1.1
2,673,361	-				+0.6
2,673,479	+				-0.4
2,673,537	+				+1.2
2,673,670	+		Psyr_2300	0.23	-0.8
2,673,674	+		Psyr_2300	0.24	-1.0
2,673,674	+		Psyr_2300	0.24	+0.1
2,673,678	+		Psyr_2300	0.24	+1.6
2,673,678	+		Psyr_2300	0.24	+1.2
2,673,849	-		Psyr_2300	0.42	+1.3
2,674,150	+		Psyr_2300	0.73	-0.8
2,674,150	+		Psyr_2300	0.73	-2.2
2,674,201	+		Psyr_2300	0.78	+0.1
2,674,201	+		Psyr_2300	0.78	-0.8
2,674,337	-				+1.0