Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2283

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
2,652,796	+		Psyr_2282	0.74	+0.6
2,652,796	+		Psyr_2282	0.74	+0.2
2,653,195	+		Psyr_2282	0.86	-2.3
2,653,196	-		Psyr_2282	0.86	+0.7
2,653,196	-		Psyr_2282	0.86	-1.6
2,653,196	-		Psyr_2282	0.86	+1.3
2,653,196	-		Psyr_2282	0.86	+0.2
2,653,208	-		Psyr_2282	0.87	-1.2
2,653,208	-		Psyr_2282	0.87	-0.6
2,653,394	-				+0.2
2,653,394	-				-1.2
2,653,396	+				+0.6
2,653,396	+				-0.4
2,653,396	+				-0.4
2,653,396	+				-1.2
2,653,396	+				-2.1
2,653,397	-				-1.8
2,653,397	-				-2.8
2,653,397	-				-0.3
2,653,397	-				-0.0
2,653,948	+		Psyr_2283	0.25	+1.6
2,653,948	+		Psyr_2283	0.25	+0.6
2,653,948	+		Psyr_2283	0.25	-0.4
2,653,948	+		Psyr_2283	0.25	-1.7
2,653,948	+		Psyr_2283	0.25	-1.6
2,653,948	+		Psyr_2283	0.25	-1.6
2,653,948	+		Psyr_2283	0.25	-1.2
2,653,949	-		Psyr_2283	0.25	-0.0
2,653,949	-		Psyr_2283	0.25	+0.6
2,653,949	-		Psyr_2283	0.25	-0.4
2,653,949	-		Psyr_2283	0.25	+1.6
2,653,949	-		Psyr_2283	0.25	-0.0
2,653,949	-		Psyr_2283	0.25	-0.8
2,653,953	-		Psyr_2283	0.25	-0.7
2,654,062	+		Psyr_2283	0.35	-0.6
2,654,063	-		Psyr_2283	0.35	-0.2
2,654,128	-		Psyr_2283	0.40	-0.8
2,654,179	+		Psyr_2283	0.45	+1.6
2,654,299	+		Psyr_2283	0.55	+0.6
2,654,432	-		Psyr_2283	0.67	-1.7
2,654,781	+				-0.4
2,654,781	+				-1.4
2,654,813	+				-2.3
2,654,813	+				-1.0
2,654,814	-				-1.7
2,654,849	-				+3.0
2,654,924	-				+6.4
2,654,926	-				+7.3
2,654,976	-				+7.0
2,655,004	+				+6.7
2,655,004	+				+5.5
2,655,004	+				+8.6
2,655,005	-				+7.3
2,655,578	+				+2.0
2,655,579	-				+2.3
2,655,579	-				+3.2
2,655,662	+				-0.2
2,655,663	-				+3.2