Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2226

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
2,586,857	+				-2.2
2,586,948	+		Psyr_2225	0.11	+0.2
2,587,349	-		Psyr_2225	0.55	-0.5
2,587,607	-		Psyr_2225	0.83	-2.2
2,587,607	-		Psyr_2225	0.83	-0.0
2,587,610	+		Psyr_2225	0.84	-2.2
2,587,610	+		Psyr_2225	0.84	-1.3
2,587,610	+		Psyr_2225	0.84	+0.8
2,587,807	+				-0.5
2,587,807	+				+1.1
2,587,807	+				-1.5
2,587,808	-				+0.7
2,587,808	-				+0.2
2,587,830	+				-0.3
2,587,942	+				+0.5
2,587,943	-		Psyr_2226	0.22	+0.4
2,588,188	+		Psyr_2226	0.50	-0.6
2,588,188	+		Psyr_2226	0.50	-0.7
2,588,189	-		Psyr_2226	0.50	-0.6
2,588,485	+		Psyr_2226	0.85	-0.4
2,588,486	-				+2.5
2,588,486	-		Psyr_2226	0.85	-1.7
2,588,518	+		Psyr_2226	0.88	-0.6
2,588,519	-		Psyr_2226	0.88	-1.4
2,588,519	-		Psyr_2226	0.88	-0.0
2,588,736	+				-0.6
2,588,736	+				+1.2
2,588,736	+				+0.1
2,588,736	+				-1.3
2,588,737	-				-0.6
2,588,737	-				+0.1
2,588,737	-				+1.1
2,588,889	-				+0.3
2,588,889	-				+0.5
2,588,918	-				-0.0
2,588,918	-				-0.0
2,588,918	-				-0.5
2,588,967	-		Psyr_2227	0.11	-2.4
2,588,987	+		Psyr_2227	0.16	-0.0
2,589,282	+		Psyr_2227	0.80	-1.0
2,589,332	+				-0.4
2,589,332	+				+0.0
2,589,409	+				+0.1
2,589,410	-				+1.0
2,589,418	+				-1.1
2,589,443	+				-0.5
2,589,453	+				-0.6
2,589,453	+				+0.7
2,589,453	+				-0.0
2,589,453	+				-0.9
2,589,454	-				-2.2
2,589,454	-				-1.6
2,589,457	+				+1.5
2,589,457	+				+0.3
2,589,474	+				+1.3
2,589,477	-				-1.9
2,589,521	+				-0.5
2,589,521	+				-1.8
2,589,522	-				-1.3
2,589,522	-				-0.2
2,589,522	-				-0.0