Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2057

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
2,403,313	+		Psyr_2056	0.15	-1.1
2,403,314	-		Psyr_2056	0.15	-1.7
2,403,314	-		Psyr_2056	0.15	+1.5
2,403,317	+		Psyr_2056	0.15	+0.1
2,403,343	+		Psyr_2056	0.19	-0.9
2,403,727	+		Psyr_2056	0.69	-0.1
2,403,727	+		Psyr_2056	0.69	+0.2
2,403,728	-		Psyr_2056	0.69	-0.3
2,403,732	+		Psyr_2056	0.70	+0.0
2,403,732	+		Psyr_2056	0.70	+1.3
2,403,901	+				-0.6
2,403,901	+				-0.5
2,403,901	+				+0.6
2,403,902	-				-1.3
2,404,012	+				+1.0
2,404,031	+				+1.6
2,404,032	-				+1.5
2,404,032	-				+0.9
2,404,197	-		Psyr_2057	0.14	+0.9
2,404,197	-		Psyr_2057	0.14	-0.9
2,404,197	-		Psyr_2057	0.14	-1.7
2,404,197	-		Psyr_2057	0.14	-0.9
2,404,378	-		Psyr_2057	0.37	+0.9
2,404,378	-		Psyr_2057	0.37	-0.6
2,404,500	-		Psyr_2057	0.52	+0.1
2,404,763	+		Psyr_2057	0.85	-1.2
2,404,869	+				+1.6
2,404,870	-				+0.5
2,405,049	+		Psyr_2058	0.65	+0.1
2,405,160	+				+2.8
2,405,186	+				+0.9
2,405,187	-				-1.0
2,405,225	-				-0.3
2,405,244	-				-1.5
2,405,359	-				-1.2
2,405,630	-		Psyr_2059	0.26	-0.3