Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1957

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
2,240,388	-		Psyr_1956	0.51	-0.6
2,240,388	-		Psyr_1956	0.51	+0.1
2,240,422	-		Psyr_1956	0.54	+0.7
2,240,634	+		Psyr_1956	0.76	+0.6
2,240,670	-		Psyr_1956	0.80	+0.4
2,240,941	+				-0.1
2,241,187	+				-0.2
2,241,187	+				+0.4
2,241,187	+				-0.9
2,241,188	-				+0.2
2,241,188	-				+1.4
2,241,188	-				+0.6
2,241,189	+				+0.6
2,241,190	-				+0.8
2,241,190	-				+1.4
2,241,190	-				+0.0
2,241,190	-				-0.7
2,241,190	-				-0.9
2,241,190	-				+1.1
2,241,190	-				+1.1
2,241,190	-				-0.7
2,241,190	-				-1.2
2,241,190	-				+1.8
2,241,313	-				-0.6
2,241,313	-				+0.1
2,241,313	-				-0.3
2,241,340	+				+1.2
2,241,341	-				-0.4
2,241,545	-				+0.1
2,241,545	-				-0.2
2,242,333	-		Psyr_1957	0.28	+0.7
2,242,413	-		Psyr_1957	0.30	+0.2
2,242,566	-		Psyr_1957	0.35	-0.2
2,242,753	+		Psyr_1957	0.40	-1.2
2,243,027	-		Psyr_1957	0.48	+0.4
2,243,027	-		Psyr_1957	0.48	-2.2
2,243,027	-		Psyr_1957	0.48	+0.5
2,243,173	+		Psyr_1957	0.52	-0.5
2,243,173	+		Psyr_1957	0.52	+0.0
2,243,174	-		Psyr_1957	0.52	+0.7
2,243,219	+		Psyr_1957	0.54	+0.1
2,243,220	-		Psyr_1957	0.54	+0.1
2,243,389	+		Psyr_1957	0.59	+0.1
2,243,389	+		Psyr_1957	0.59	+0.4
2,243,390	-		Psyr_1957	0.59	-0.0
2,243,390	-		Psyr_1957	0.59	-0.8
2,243,390	-		Psyr_1957	0.59	-0.6
2,243,390	-		Psyr_1957	0.59	-0.2
2,243,805	-		Psyr_1957	0.71	+0.8
2,243,805	-		Psyr_1957	0.71	-0.3
2,243,805	-		Psyr_1957	0.71	+0.6
2,243,805	-		Psyr_1957	0.71	+0.4
2,243,805	-		Psyr_1957	0.71	+0.6
2,243,821	+		Psyr_1957	0.71	-0.1
2,243,822	-		Psyr_1957	0.71	+1.1
2,243,992	+		Psyr_1957	0.76	+1.4
2,243,992	+		Psyr_1957	0.76	-0.0
2,244,140	-		Psyr_1957	0.81	+2.6
2,244,287	-		Psyr_1957	0.85	+0.2
2,244,379	+		Psyr_1957	0.88	-0.2
2,244,380	-		Psyr_1957	0.88	-0.1
2,244,380	-		Psyr_1957	0.88	+0.2
2,245,597	-		Psyr_1958	0.10	-0.4
2,245,597	-		Psyr_1958	0.10	-0.2