Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1812

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
2,084,530	+		Psyr_1811	0.76	+1.2
2,084,530	+		Psyr_1811	0.76	+0.3
2,084,531	-		Psyr_1811	0.76	-0.5
2,084,943	+				+0.2
2,084,943	+				-0.1
2,084,944	-				-0.7
2,084,979	-				-1.1
2,085,206	-				-0.8
2,085,300	-				+0.9
2,085,442	+		Psyr_1812	0.18	-1.1
2,085,442	+		Psyr_1812	0.18	-1.8
2,085,443	-		Psyr_1812	0.18	+0.0
2,085,493	+		Psyr_1812	0.22	+1.2
2,085,493	+		Psyr_1812	0.22	-0.0
2,085,493	+		Psyr_1812	0.22	-0.6
2,085,721	-		Psyr_1812	0.39	-2.1
2,085,751	+		Psyr_1812	0.41	-0.9
2,085,826	+		Psyr_1812	0.47	-1.7
2,085,826	+		Psyr_1812	0.47	-1.0
2,085,826	+		Psyr_1812	0.47	-0.8
2,085,826	+		Psyr_1812	0.47	-1.4
2,085,913	+		Psyr_1812	0.53	-1.4
2,086,210	+		Psyr_1812	0.75	-0.2
2,086,210	+		Psyr_1812	0.75	-1.7
2,086,211	-		Psyr_1812	0.75	-0.3
2,086,211	-		Psyr_1812	0.75	-0.0
2,086,211	-		Psyr_1812	0.75	-0.4
2,086,244	-		Psyr_1812	0.78	-1.6
2,086,319	-		Psyr_1812	0.84	-1.8
2,086,423	+				+1.2
2,086,424	-				-0.2
2,086,424	-				-2.5
2,086,424	-				-0.7
2,086,424	-				+0.6
2,086,620	+		Psyr_1813	0.10	-0.8
2,086,620	+		Psyr_1813	0.10	-0.7
2,086,620	+		Psyr_1813	0.10	-0.8
2,086,621	-		Psyr_1813	0.10	+1.5
2,086,621	-		Psyr_1813	0.10	+0.4
2,086,621	-		Psyr_1813	0.10	-1.1
2,086,621	-		Psyr_1813	0.10	-0.8
2,086,621	-		Psyr_1813	0.10	-0.8
2,086,621	-		Psyr_1813	0.10	+0.7
2,086,621	-		Psyr_1813	0.10	-0.2
2,086,621	-		Psyr_1813	0.10	-0.4
2,086,621	-		Psyr_1813	0.10	+1.3
2,086,621	-		Psyr_1813	0.10	+0.5
2,086,797	+		Psyr_1813	0.31	-0.4
2,086,875	+		Psyr_1813	0.40	-1.4
2,086,875	+		Psyr_1813	0.40	+0.9
2,086,875	+		Psyr_1813	0.40	-0.1
2,086,875	+		Psyr_1813	0.40	+0.6
2,086,875	+		Psyr_1813	0.40	-0.3
2,086,876	-		Psyr_1813	0.41	-0.4
2,086,876	-		Psyr_1813	0.41	+0.1
2,086,876	-		Psyr_1813	0.41	+0.2
2,086,876	-		Psyr_1813	0.41	-0.2
2,087,208	+		Psyr_1813	0.80	+1.6
2,087,208	+		Psyr_1813	0.80	+1.5
2,087,209	-		Psyr_1813	0.80	+1.5
2,087,278	+		Psyr_1813	0.88	+0.5
2,087,279	-		Psyr_1813	0.89	+0.5
2,087,448	+				+0.2
2,087,449	-				+0.7
2,087,449	-				+0.4
2,087,449	-				+1.2