Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0737

Experiment: KB with Nalidixic 12.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 12.5 ug/ml
840,452	+				+0.3
840,452	+				-0.9
840,452	+				-1.5
840,452	+				+0.8
840,452	+				-0.4
840,454	+				-0.2
840,829	-		Psyr_0735	0.79	-0.8
840,829	-		Psyr_0735	0.79	-0.7
840,829	-		Psyr_0735	0.79	-0.2
840,829	-		Psyr_0735	0.79	-0.3
840,892	+				-1.2
840,938	-		Psyr_0736	0.12	-0.5
840,957	-		Psyr_0736	0.20	-0.4
840,957	-		Psyr_0736	0.20	+0.5
840,957	-		Psyr_0736	0.20	-0.0
840,957	-		Psyr_0736	0.20	-0.4
840,957	-		Psyr_0736	0.20	+0.1
840,957	-		Psyr_0736	0.20	-0.4
841,143	-				+0.2
841,143	-				+0.4
841,152	-				+1.0
841,152	-				-0.6
841,152	-				-0.9
841,154	+				+0.6
841,154	+				-1.2
841,154	+				-2.1
841,154	+				-0.2
841,154	+				-1.0
841,155	-				-0.1
841,159	+				-0.7
841,160	-				+1.0
841,160	-				-0.9
841,223	+				-0.2
841,223	+				+2.1
841,224	-				+1.0
841,340	-				-0.4
841,354	+				-2.7
841,357	+				+0.1
841,446	-		Psyr_0737	0.19	-1.3
841,446	-		Psyr_0737	0.19	-0.4
841,487	-		Psyr_0737	0.29	-0.5
841,487	-		Psyr_0737	0.29	+0.3
841,497	+		Psyr_0737	0.31	-1.4
841,519	+		Psyr_0737	0.37	-1.7
841,520	-		Psyr_0737	0.37	-0.1
841,545	-		Psyr_0737	0.43	-0.3
841,545	-		Psyr_0737	0.43	+0.6
841,571	-		Psyr_0737	0.49	-0.6
841,571	-		Psyr_0737	0.49	+1.6
841,571	-		Psyr_0737	0.49	-1.5
841,571	-		Psyr_0737	0.49	-0.9
841,574	+		Psyr_0737	0.50	-1.9
841,574	+		Psyr_0737	0.50	-1.7
841,575	-		Psyr_0737	0.50	-0.1
841,575	-		Psyr_0737	0.50	-0.7
841,640	-		Psyr_0737	0.66	-0.8
841,641	+		Psyr_0737	0.66	-2.4
841,641	+		Psyr_0737	0.66	-1.2
841,641	+		Psyr_0737	0.66	-0.9
841,642	-		Psyr_0737	0.66	-0.9
841,716	+		Psyr_0737	0.84	+0.7
841,784	-				-2.5
841,880	+				+2.6
841,881	-				+0.1
841,885	-				-1.9
841,895	-				-0.2
841,965	-				-0.4
842,014	+				+0.2
842,024	+				-0.1
842,024	+				-0.7
842,144	-				-0.7
842,189	+				-1.2
842,207	-				-0.9
842,207	-				+1.0
842,212	-				-0.2
842,212	-				-2.4
842,212	-				-0.3
842,212	-				-2.2
842,236	+				-1.2
842,236	+				-1.7
842,236	+				+0.7
842,315	+				-0.2
842,372	+				-0.4
842,372	+				-0.7
842,373	-				+0.3
842,378	-				-0.4
842,378	-				-0.6
842,403	+				+1.1
842,403	+				+0.1
842,404	-				-0.6
842,440	+				+0.4
842,474	+				-0.7
842,474	+				+0.1
842,475	-				+0.1
842,475	-				+0.1
842,493	+				-1.4
842,494	-				-0.6