Experiment: KB with Nalidixic 12.5 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0218 and Psyr_0219 are separated by 28 nucleotides
Psyr_0218: Psyr_0218 - N-acetylglutamate kinase, at 231,075 to 231,980
_0218
Psyr_0219: Psyr_0219 - phosphomannomutase, at 232,009 to 233,406
_0219
Position (kb) 232
233
234 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 231.043 kb on - strand at 231.065 kb on + strand at 231.066 kb on - strand at 231.109 kb on - strand at 231.109 kb on - strand at 231.920 kb on - strand at 232.291 kb on - strand, within Psyr_0219 at 232.291 kb on - strand, within Psyr_0219 at 232.370 kb on + strand, within Psyr_0219 at 232.370 kb on + strand, within Psyr_0219 at 232.370 kb on + strand, within Psyr_0219 at 232.370 kb on + strand, within Psyr_0219 at 232.371 kb on - strand, within Psyr_0219 at 232.371 kb on - strand, within Psyr_0219 at 232.371 kb on - strand, within Psyr_0219 at 232.371 kb on - strand, within Psyr_0219 at 232.371 kb on - strand, within Psyr_0219 at 232.371 kb on - strand, within Psyr_0219 at 232.371 kb on - strand, within Psyr_0219 at 232.371 kb on - strand, within Psyr_0219 at 232.371 kb on - strand, within Psyr_0219 at 232.375 kb on - strand, within Psyr_0219 at 232.375 kb on - strand, within Psyr_0219 at 232.375 kb on - strand, within Psyr_0219 at 232.925 kb on + strand, within Psyr_0219 at 232.926 kb on - strand, within Psyr_0219 at 233.060 kb on + strand, within Psyr_0219 at 233.060 kb on + strand, within Psyr_0219 at 233.060 kb on + strand, within Psyr_0219 at 233.060 kb on + strand, within Psyr_0219 at 233.060 kb on + strand, within Psyr_0219 at 233.060 kb on + strand, within Psyr_0219 at 233.061 kb on - strand, within Psyr_0219 at 233.061 kb on - strand, within Psyr_0219 at 233.061 kb on - strand, within Psyr_0219 at 233.126 kb on + strand, within Psyr_0219 at 233.127 kb on - strand, within Psyr_0219 at 233.127 kb on - strand, within Psyr_0219 at 233.127 kb on - strand, within Psyr_0219 at 233.127 kb on - strand, within Psyr_0219 at 233.127 kb on - strand, within Psyr_0219 at 233.129 kb on + strand, within Psyr_0219 at 233.129 kb on + strand, within Psyr_0219 at 233.130 kb on - strand, within Psyr_0219 at 233.155 kb on + strand, within Psyr_0219 at 233.155 kb on + strand, within Psyr_0219 at 233.155 kb on + strand, within Psyr_0219 at 233.155 kb on + strand, within Psyr_0219 at 233.155 kb on + strand, within Psyr_0219 at 233.156 kb on - strand, within Psyr_0219 at 233.156 kb on - strand, within Psyr_0219 at 233.156 kb on - strand, within Psyr_0219 at 233.303 kb on + strand at 233.365 kb on - strand at 233.365 kb on - strand at 233.365 kb on - strand at 233.365 kb on - strand at 233.416 kb on - strand at 233.547 kb on + strand at 233.602 kb on - strand at 233.733 kb on + strand at 233.734 kb on - strand at 233.734 kb on - strand at 233.734 kb on - strand at 234.045 kb on + strand at 234.046 kb on - strand at 234.092 kb on + strand at 234.092 kb on + strand at 234.092 kb on + strand at 234.092 kb on + strand at 234.093 kb on - strand at 234.093 kb on - strand at 234.093 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Nalidixic 12.5 ug/ml remove 231,043 - +1.6 231,065 + -3.5 231,066 - -0.2 231,109 - -1.0 231,109 - -1.8 231,920 - +1.6 232,291 - Psyr_0219 0.20 -0.9 232,291 - Psyr_0219 0.20 +0.9 232,370 + Psyr_0219 0.26 +0.6 232,370 + Psyr_0219 0.26 +3.9 232,370 + Psyr_0219 0.26 +0.6 232,370 + Psyr_0219 0.26 +1.7 232,371 - Psyr_0219 0.26 +1.8 232,371 - Psyr_0219 0.26 +1.4 232,371 - Psyr_0219 0.26 +1.3 232,371 - Psyr_0219 0.26 +1.4 232,371 - Psyr_0219 0.26 -2.2 232,371 - Psyr_0219 0.26 +0.6 232,371 - Psyr_0219 0.26 +0.7 232,371 - Psyr_0219 0.26 +0.8 232,371 - Psyr_0219 0.26 +1.1 232,375 - Psyr_0219 0.26 +0.6 232,375 - Psyr_0219 0.26 +1.5 232,375 - Psyr_0219 0.26 +1.0 232,925 + Psyr_0219 0.66 +1.2 232,926 - Psyr_0219 0.66 +1.5 233,060 + Psyr_0219 0.75 +0.1 233,060 + Psyr_0219 0.75 +2.2 233,060 + Psyr_0219 0.75 -2.0 233,060 + Psyr_0219 0.75 +1.9 233,060 + Psyr_0219 0.75 +2.2 233,060 + Psyr_0219 0.75 -0.4 233,061 - Psyr_0219 0.75 +0.3 233,061 - Psyr_0219 0.75 +3.2 233,061 - Psyr_0219 0.75 +2.7 233,126 + Psyr_0219 0.80 +1.1 233,127 - Psyr_0219 0.80 +2.4 233,127 - Psyr_0219 0.80 +1.7 233,127 - Psyr_0219 0.80 +2.3 233,127 - Psyr_0219 0.80 +2.2 233,127 - Psyr_0219 0.80 +1.3 233,129 + Psyr_0219 0.80 +2.0 233,129 + Psyr_0219 0.80 +1.8 233,130 - Psyr_0219 0.80 +3.2 233,155 + Psyr_0219 0.82 +1.5 233,155 + Psyr_0219 0.82 +1.0 233,155 + Psyr_0219 0.82 +0.6 233,155 + Psyr_0219 0.82 +1.3 233,155 + Psyr_0219 0.82 -1.0 233,156 - Psyr_0219 0.82 +2.0 233,156 - Psyr_0219 0.82 +2.2 233,156 - Psyr_0219 0.82 +1.2 233,303 + +2.1 233,365 - +0.4 233,365 - +0.6 233,365 - +1.0 233,365 - +2.0 233,416 - +1.3 233,547 + +1.0 233,602 - -0.4 233,733 + +0.1 233,734 - -0.1 233,734 - -0.5 233,734 - -0.1 234,045 + -0.6 234,046 - -0.2 234,092 + -1.0 234,092 + -0.8 234,092 + -1.3 234,092 + -2.2 234,093 - -1.0 234,093 - -0.0 234,093 - -1.4
Or see this region's nucleotide sequence