Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2315

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,634,027	+		Pf1N1B4_2313	0.85	+1.4
2,634,027	+		Pf1N1B4_2313	0.85	+2.1
2,634,028	-		Pf1N1B4_2313	0.85	+0.2
2,634,039	+		Pf1N1B4_2313	0.85	+0.8
2,634,039	+		Pf1N1B4_2313	0.85	-0.1
2,634,040	-		Pf1N1B4_2313	0.85	+0.5
2,634,040	-		Pf1N1B4_2313	0.85	+0.3
2,634,040	-		Pf1N1B4_2313	0.85	-0.5
2,634,104	+		Pf1N1B4_2313	0.89	-0.8
2,634,104	+		Pf1N1B4_2313	0.89	+0.7
2,634,104	+		Pf1N1B4_2313	0.89	-0.8
2,634,105	-		Pf1N1B4_2313	0.90	+1.5
2,634,105	-		Pf1N1B4_2313	0.90	-1.5
2,634,105	-		Pf1N1B4_2313	0.90	-0.4
2,634,105	-		Pf1N1B4_2313	0.90	-0.8
2,634,105	-		Pf1N1B4_2313	0.90	+0.7
2,634,105	-		Pf1N1B4_2313	0.90	-0.2
2,634,105	-		Pf1N1B4_2313	0.90	+0.2
2,634,105	-		Pf1N1B4_2313	0.90	+0.6
2,634,111	+		Pf1N1B4_2313	0.90	-0.8
2,634,112	-				+0.4
2,634,112	-				-0.5
2,634,219	+				-0.3
2,634,220	-				+2.1
2,634,220	-				+1.1
2,634,220	-				+0.5
2,634,285	+				-0.6
2,634,285	+				+1.0
2,634,285	+				-1.0
2,634,288	+				+0.4
2,634,288	+				+0.8
2,634,288	+				-0.3
2,634,288	+				-0.1
2,634,289	-				-0.1
2,634,482	-		Pf1N1B4_2314	0.10	+1.1
2,634,845	+		Pf1N1B4_2314	0.77	+0.9
2,634,845	+		Pf1N1B4_2314	0.77	+0.0
2,634,846	-		Pf1N1B4_2314	0.77	+0.7
2,634,876	+		Pf1N1B4_2314	0.82	+0.7
2,634,920	+				+0.4
2,634,920	+				+0.8
2,634,921	-				-0.8
2,634,921	-				+1.5
2,634,921	-				+0.8
2,634,921	-				+2.1
2,634,972	+				+0.4
2,634,972	+				+0.2
2,634,973	-				-1.3
2,634,978	+				+0.1
2,634,979	-				-0.3
2,634,979	-				-0.4
2,635,042	-				-0.6
2,635,042	-				+0.8
2,635,055	+				-0.5
2,635,055	+				-0.6
2,635,055	+				+0.2
2,635,056	-				-0.3
2,635,139	+				-0.3
2,635,272	-		Pf1N1B4_2315	0.19	-0.8
2,635,280	+		Pf1N1B4_2315	0.20	-0.4
2,635,280	+		Pf1N1B4_2315	0.20	+0.2
2,635,280	+		Pf1N1B4_2315	0.20	-0.6
2,635,280	+		Pf1N1B4_2315	0.20	+0.2
2,635,280	+		Pf1N1B4_2315	0.20	+0.3
2,635,280	+		Pf1N1B4_2315	0.20	-0.1
2,635,280	+		Pf1N1B4_2315	0.20	-1.4
2,635,281	-		Pf1N1B4_2315	0.20	-0.1
2,635,281	-		Pf1N1B4_2315	0.20	-0.1
2,635,283	+		Pf1N1B4_2315	0.20	+1.0
2,635,284	-		Pf1N1B4_2315	0.20	-1.2
2,635,316	+		Pf1N1B4_2315	0.22	+0.2
2,635,316	+		Pf1N1B4_2315	0.22	+0.1
2,635,317	-		Pf1N1B4_2315	0.22	-1.8
2,635,343	+		Pf1N1B4_2315	0.24	-0.5
2,635,343	+		Pf1N1B4_2315	0.24	+0.2
2,635,343	+		Pf1N1B4_2315	0.24	-0.6
2,635,343	+				+0.9
2,635,344	-		Pf1N1B4_2315	0.24	+1.3
2,635,344	-		Pf1N1B4_2315	0.24	+1.5
2,635,344	-		Pf1N1B4_2315	0.24	+1.0
2,635,544	+		Pf1N1B4_2315	0.38	+0.5
2,635,544	+		Pf1N1B4_2315	0.38	-0.1
2,635,545	-		Pf1N1B4_2315	0.38	-0.1
2,635,545	-		Pf1N1B4_2315	0.38	+0.4
2,635,545	-		Pf1N1B4_2315	0.38	+0.3
2,635,545	-		Pf1N1B4_2315	0.38	+0.5
2,635,545	-		Pf1N1B4_2315	0.38	+0.0
2,635,545	-		Pf1N1B4_2315	0.38	-0.3
2,635,595	+		Pf1N1B4_2315	0.42	-0.5
2,635,640	+		Pf1N1B4_2315	0.45	-1.1
2,635,640	+		Pf1N1B4_2315	0.45	+1.5
2,635,641	-		Pf1N1B4_2315	0.45	+0.1
2,635,641	-		Pf1N1B4_2315	0.45	+0.1
2,635,834	+		Pf1N1B4_2315	0.58	+0.2
2,635,835	-		Pf1N1B4_2315	0.58	-0.3
2,635,835	-		Pf1N1B4_2315	0.58	-0.2
2,635,835	-		Pf1N1B4_2315	0.58	-0.3
2,635,835	-		Pf1N1B4_2315	0.58	-0.6
2,635,835	-		Pf1N1B4_2315	0.58	+1.7
2,636,030	+		Pf1N1B4_2315	0.72	+0.0
2,636,030	+		Pf1N1B4_2315	0.72	-0.6
2,636,030	+		Pf1N1B4_2315	0.72	-0.7
2,636,030	+		Pf1N1B4_2315	0.72	-0.1
2,636,031	-		Pf1N1B4_2315	0.72	-0.1
2,636,040	-		Pf1N1B4_2315	0.73	-0.1
2,636,081	+		Pf1N1B4_2315	0.76	-0.9
2,636,168	+		Pf1N1B4_2315	0.82	-0.1
2,636,168	+		Pf1N1B4_2315	0.82	-0.5
2,636,169	-		Pf1N1B4_2315	0.82	+0.3
2,636,299	+				-0.1
2,636,346	-				+0.5
2,636,412	-				+0.7
2,636,446	+				+0.9
2,636,446	+				+0.4
2,636,447	-				-0.5
2,636,447	-				+0.2
2,636,451	+				-0.8
2,636,451	+				+0.1
2,636,451	+				-0.1
2,636,452	-				-0.1
2,636,452	-				-0.7
2,636,452	-				+0.5
2,636,467	-				+0.5
2,636,467	-				-0.1
2,636,474	-				-0.5
2,636,474	-				-0.6
2,636,474	-				+0.7
2,636,474	-				-0.8
2,636,474	-				-0.8
2,636,480	+				+1.2
2,636,481	-				-0.3
2,636,516	+				+0.8
2,636,517	-				-0.5
2,636,531	-				-1.1
2,636,537	+				+0.9
2,636,537	+				+0.5
2,636,538	-				+1.5
2,636,538	-				-0.2
2,636,538	-				-0.2
2,636,538	-				+0.1
2,636,538	-				+2.1
2,636,538	-				-0.3
2,636,538	-				+0.2
2,636,538	-				-0.4
2,636,538	-				-1.8
2,636,564	+				+0.1
2,636,564	+				-0.4
2,636,565	-				+1.5
2,636,565	-				+0.5
2,636,654	+		Pf1N1B4_2316	0.11	-1.5
2,636,654	+		Pf1N1B4_2316	0.11	-0.9
2,636,654	+		Pf1N1B4_2316	0.11	+0.2
2,636,706	+		Pf1N1B4_2316	0.19	+0.5
2,636,706	+		Pf1N1B4_2316	0.19	-0.6
2,636,707	-		Pf1N1B4_2316	0.19	+0.7
2,636,707	-		Pf1N1B4_2316	0.19	+0.1
2,636,707	-		Pf1N1B4_2316	0.19	-0.2
2,636,707	-		Pf1N1B4_2316	0.19	-0.8
2,636,707	-		Pf1N1B4_2316	0.19	+0.9
2,636,707	-		Pf1N1B4_2316	0.19	-1.0
2,636,709	+		Pf1N1B4_2316	0.20	+0.3
2,636,709	+		Pf1N1B4_2316	0.20	+0.5
2,636,709	+		Pf1N1B4_2316	0.20	+0.5
2,636,710	-		Pf1N1B4_2316	0.20	-0.5
2,636,710	-		Pf1N1B4_2316	0.20	-0.1
2,636,758	-		Pf1N1B4_2316	0.27	+0.7
2,636,829	+		Pf1N1B4_2316	0.38	+0.4
2,636,830	-		Pf1N1B4_2316	0.38	-0.7
2,636,830	-		Pf1N1B4_2316	0.38	+0.6
2,636,863	-		Pf1N1B4_2316	0.43	-0.6
2,636,970	+		Pf1N1B4_2316	0.58	+0.5
2,636,970	+		Pf1N1B4_2316	0.58	-0.1
2,636,970	+		Pf1N1B4_2316	0.58	-0.3
2,636,970	+		Pf1N1B4_2316	0.58	+0.9
2,636,971	-		Pf1N1B4_2316	0.59	+0.5
2,636,971	-				-0.8
2,636,971	-		Pf1N1B4_2316	0.59	+0.5
2,636,971	-		Pf1N1B4_2316	0.59	+0.2
2,636,971	-		Pf1N1B4_2316	0.59	+1.8
2,636,971	-		Pf1N1B4_2316	0.59	+0.3
2,636,971	-		Pf1N1B4_2316	0.59	+0.4
2,636,971	-		Pf1N1B4_2316	0.59	+0.4
2,637,081	-		Pf1N1B4_2316	0.75	-0.6
2,637,081	-		Pf1N1B4_2316	0.75	+0.1
2,637,081	-		Pf1N1B4_2316	0.75	+0.1
2,637,132	+		Pf1N1B4_2316	0.83	+0.1
2,637,132	+		Pf1N1B4_2316	0.83	-0.2
2,637,132	+				+0.9
2,637,133	-		Pf1N1B4_2316	0.83	+1.5
2,637,210	+				+1.8
2,637,210	+				+1.5
2,637,210	+				+0.7
2,637,210	+				+0.5
2,637,210	+				-0.6
2,637,210	+				-0.6
2,637,210	+				-0.9
2,637,211	-				+0.5
2,637,211	-				-0.4
2,637,211	-				-0.9
2,637,211	-				-0.7
2,637,211	-				+1.5
2,637,211	-				-1.5
2,637,211	-				-0.5
2,637,211	-				-0.8
2,637,247	-				+0.1
2,637,258	+				-1.8
2,637,258	+				+1.5
2,637,258	+				+1.5
2,637,258	+				-1.1
2,637,259	-				+1.2
2,637,259	-				-0.6
2,637,259	-				-0.7
2,637,410	+		Pf1N1B4_2317	0.14	-0.1
2,637,410	+		Pf1N1B4_2317	0.14	-0.8
2,637,410	+		Pf1N1B4_2317	0.14	-0.5
2,637,424	+		Pf1N1B4_2317	0.15	-0.2
2,637,424	+		Pf1N1B4_2317	0.15	+0.2
2,637,425	-		Pf1N1B4_2317	0.15	-0.2
2,637,425	-		Pf1N1B4_2317	0.15	-1.8