Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS07670 and HSERO_RS07675 are separated by 9 nucleotides HSERO_RS07675 and HSERO_RS07680 are separated by 38 nucleotides HSERO_RS07680 and HSERO_RS07685 are separated by 258 nucleotides
HSERO_RS07670: HSERO_RS07670 - major facilitator transporter, at 1,753,670 to 1,755,073
_RS07670
HSERO_RS07675: HSERO_RS07675 - multidrug DMT transporter, at 1,755,083 to 1,755,991
_RS07675
HSERO_RS07680: HSERO_RS07680 - magnesium transporter CorA, at 1,756,030 to 1,757,016
_RS07680
HSERO_RS07685: HSERO_RS07685 - membrane protein, at 1,757,275 to 1,759,392
_RS07685
Position (kb) 1756
1757
1758 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1755.139 kb on - strand at 1755.153 kb on - strand at 1755.316 kb on + strand, within HSERO_RS07675 at 1755.593 kb on - strand, within HSERO_RS07675 at 1755.825 kb on - strand, within HSERO_RS07675 at 1755.998 kb on - strand at 1756.293 kb on - strand, within HSERO_RS07680 at 1756.342 kb on - strand, within HSERO_RS07680 at 1756.512 kb on + strand, within HSERO_RS07680 at 1756.839 kb on - strand, within HSERO_RS07680 at 1756.839 kb on - strand, within HSERO_RS07680 at 1756.866 kb on - strand, within HSERO_RS07680 at 1756.951 kb on - strand at 1756.978 kb on - strand at 1757.010 kb on + strand at 1757.692 kb on - strand, within HSERO_RS07685 at 1757.725 kb on - strand, within HSERO_RS07685 at 1757.988 kb on - strand, within HSERO_RS07685
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,755,139 - +2.6 1,755,153 - +0.3 1,755,316 + HSERO_RS07675 0.26 +0.0 1,755,593 - HSERO_RS07675 0.56 -1.2 1,755,825 - HSERO_RS07675 0.82 -2.4 1,755,998 - -2.1 1,756,293 - HSERO_RS07680 0.27 -0.1 1,756,342 - HSERO_RS07680 0.32 -0.1 1,756,512 + HSERO_RS07680 0.49 -0.8 1,756,839 - HSERO_RS07680 0.82 -0.5 1,756,839 - HSERO_RS07680 0.82 +0.4 1,756,866 - HSERO_RS07680 0.85 +1.7 1,756,951 - +0.1 1,756,978 - +0.9 1,757,010 + -1.8 1,757,692 - HSERO_RS07685 0.20 +2.0 1,757,725 - HSERO_RS07685 0.21 +0.6 1,757,988 - HSERO_RS07685 0.34 +0.8
Or see this region's nucleotide sequence