Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00255 and HSERO_RS00260 overlap by 4 nucleotides HSERO_RS00260 and HSERO_RS00265 are separated by 19 nucleotides HSERO_RS00265 and HSERO_RS00270 are separated by 345 nucleotides HSERO_RS00270 and HSERO_RS00275 are separated by 126 nucleotides
HSERO_RS00255: HSERO_RS00255 - iron transporter FeoB, at 64,343 to 66,169
_RS00255
HSERO_RS00260: HSERO_RS00260 - hypothetical protein, at 66,166 to 66,453
_RS00260
HSERO_RS00265: HSERO_RS00265 - threonine dehydratase, at 66,473 to 67,678
_RS00265
HSERO_RS00270: HSERO_RS00270 - hypothetical protein, at 68,024 to 68,380
_RS00270
HSERO_RS00275: HSERO_RS00275 - methylated-DNA--protein-cysteine methyltransferase, at 68,507 to 69,079
_RS00275
Position (kb) 66
67
68 Strain fitness (log2 ratio) -1
0
1
2 at 65.481 kb on + strand, within HSERO_RS00255 at 65.726 kb on + strand, within HSERO_RS00255 at 65.726 kb on + strand, within HSERO_RS00255 at 65.778 kb on - strand, within HSERO_RS00255 at 65.812 kb on - strand, within HSERO_RS00255 at 65.820 kb on + strand, within HSERO_RS00255 at 65.925 kb on - strand, within HSERO_RS00255 at 65.954 kb on + strand, within HSERO_RS00255 at 65.962 kb on - strand, within HSERO_RS00255 at 66.118 kb on + strand at 66.118 kb on + strand at 66.148 kb on - strand at 66.149 kb on - strand at 66.363 kb on - strand, within HSERO_RS00260 at 66.709 kb on + strand, within HSERO_RS00265 at 66.795 kb on - strand, within HSERO_RS00265 at 66.969 kb on - strand, within HSERO_RS00265 at 67.049 kb on - strand, within HSERO_RS00265 at 67.180 kb on - strand, within HSERO_RS00265 at 67.525 kb on + strand, within HSERO_RS00265 at 67.541 kb on + strand, within HSERO_RS00265 at 67.584 kb on + strand at 67.584 kb on + strand at 67.584 kb on + strand at 67.643 kb on + strand at 67.833 kb on - strand at 67.878 kb on - strand at 67.969 kb on + strand at 68.034 kb on + strand at 68.146 kb on + strand, within HSERO_RS00270 at 68.229 kb on - strand, within HSERO_RS00270 at 68.533 kb on - strand at 68.632 kb on + strand, within HSERO_RS00275 at 68.647 kb on - strand, within HSERO_RS00275
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 65,481 + HSERO_RS00255 0.62 +0.6 65,726 + HSERO_RS00255 0.76 -0.0 65,726 + HSERO_RS00255 0.76 -0.1 65,778 - HSERO_RS00255 0.79 +0.5 65,812 - HSERO_RS00255 0.80 +0.2 65,820 + HSERO_RS00255 0.81 +0.2 65,925 - HSERO_RS00255 0.87 +1.0 65,954 + HSERO_RS00255 0.88 +1.8 65,962 - HSERO_RS00255 0.89 +0.2 66,118 + -0.0 66,118 + -1.5 66,148 - +1.6 66,149 - -0.7 66,363 - HSERO_RS00260 0.68 -0.0 66,709 + HSERO_RS00265 0.20 -0.6 66,795 - HSERO_RS00265 0.27 -0.5 66,969 - HSERO_RS00265 0.41 +1.2 67,049 - HSERO_RS00265 0.48 -0.4 67,180 - HSERO_RS00265 0.59 -1.1 67,525 + HSERO_RS00265 0.87 -1.3 67,541 + HSERO_RS00265 0.89 -1.2 67,584 + -0.7 67,584 + -0.8 67,584 + -0.8 67,643 + -0.1 67,833 - +1.3 67,878 - -0.5 67,969 + -0.1 68,034 + +0.2 68,146 + HSERO_RS00270 0.34 +0.0 68,229 - HSERO_RS00270 0.57 +0.5 68,533 - -0.2 68,632 + HSERO_RS00275 0.22 -0.3 68,647 - HSERO_RS00275 0.24 +1.8
Or see this region's nucleotide sequence