Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_15350 and AO356_15355 are separated by 127 nucleotides
AO356_15350: AO356_15350 - peptidase S66, at 3,476,367 to 3,477,299
_15350
AO356_15355: AO356_15355 - murein transglycosylase, at 3,477,427 to 3,478,749
_15355
Position (kb)
3476
3477
3478 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3475.466 kb on + strand at 3475.467 kb on - strand at 3475.467 kb on - strand at 3475.467 kb on - strand at 3475.468 kb on + strand at 3475.468 kb on + strand at 3475.469 kb on - strand at 3475.469 kb on - strand at 3475.482 kb on + strand at 3475.482 kb on + strand at 3475.482 kb on + strand at 3475.482 kb on + strand at 3475.483 kb on - strand at 3475.882 kb on + strand at 3475.882 kb on + strand at 3475.882 kb on + strand at 3475.882 kb on + strand at 3475.883 kb on - strand at 3475.883 kb on - strand at 3475.883 kb on - strand at 3475.883 kb on - strand at 3475.894 kb on + strand at 3475.895 kb on - strand at 3475.954 kb on + strand at 3475.954 kb on + strand at 3475.954 kb on + strand at 3475.954 kb on + strand at 3475.954 kb on + strand at 3475.954 kb on + strand at 3475.955 kb on - strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.958 kb on + strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3475.959 kb on - strand at 3476.079 kb on + strand at 3476.079 kb on + strand at 3476.080 kb on - strand at 3476.080 kb on - strand at 3476.296 kb on + strand at 3476.310 kb on + strand at 3476.310 kb on + strand at 3476.310 kb on + strand at 3476.310 kb on + strand at 3476.310 kb on + strand at 3476.310 kb on + strand at 3476.310 kb on + strand at 3476.311 kb on - strand at 3476.311 kb on - strand at 3476.311 kb on - strand at 3476.311 kb on - strand at 3476.311 kb on - strand at 3476.311 kb on - strand at 3476.311 kb on - strand at 3476.311 kb on - strand at 3476.314 kb on + strand at 3476.315 kb on - strand at 3476.315 kb on - strand at 3476.338 kb on + strand at 3476.338 kb on + strand at 3476.338 kb on + strand at 3476.338 kb on + strand at 3476.338 kb on + strand at 3476.338 kb on + strand at 3476.338 kb on + strand at 3476.338 kb on + strand at 3476.338 kb on + strand at 3476.339 kb on - strand at 3476.339 kb on - strand at 3476.339 kb on - strand at 3476.339 kb on - strand at 3476.339 kb on - strand at 3476.339 kb on - strand at 3476.339 kb on - strand at 3476.339 kb on - strand at 3476.339 kb on - strand at 3476.339 kb on - strand at 3476.350 kb on + strand at 3476.350 kb on + strand at 3476.350 kb on + strand at 3476.351 kb on - strand at 3476.351 kb on - strand at 3476.351 kb on - strand at 3476.351 kb on - strand at 3476.351 kb on - strand at 3476.374 kb on + strand at 3476.375 kb on - strand at 3476.557 kb on + strand, within AO356_15350 at 3477.305 kb on + strand at 3477.305 kb on + strand at 3477.305 kb on + strand at 3477.305 kb on + strand at 3477.305 kb on + strand at 3477.305 kb on + strand at 3477.305 kb on + strand at 3477.305 kb on + strand at 3477.306 kb on - strand at 3477.306 kb on - strand at 3477.306 kb on - strand at 3477.435 kb on + strand at 3477.560 kb on + strand, within AO356_15355 at 3477.560 kb on + strand, within AO356_15355 at 3477.560 kb on + strand, within AO356_15355 at 3477.560 kb on + strand, within AO356_15355 at 3477.560 kb on + strand, within AO356_15355 at 3477.560 kb on + strand, within AO356_15355 at 3477.560 kb on + strand, within AO356_15355 at 3477.561 kb on - strand, within AO356_15355 at 3477.642 kb on - strand, within AO356_15355 at 3477.695 kb on + strand, within AO356_15355 at 3477.696 kb on - strand, within AO356_15355 at 3477.696 kb on - strand, within AO356_15355 at 3477.713 kb on + strand, within AO356_15355 at 3477.714 kb on - strand, within AO356_15355 at 3477.714 kb on - strand, within AO356_15355 at 3477.830 kb on + strand, within AO356_15355 at 3477.830 kb on + strand, within AO356_15355 at 3477.896 kb on + strand, within AO356_15355 at 3477.896 kb on + strand, within AO356_15355 at 3477.897 kb on - strand, within AO356_15355 at 3477.897 kb on - strand, within AO356_15355 at 3477.897 kb on - strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.196 kb on + strand, within AO356_15355
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 3,475,466 + +0.9 3,475,467 - +0.4 3,475,467 - -0.2 3,475,467 - -1.2 3,475,468 + +1.0 3,475,468 + +0.2 3,475,469 - -0.0 3,475,469 - +0.2 3,475,482 + -0.4 3,475,482 + +0.5 3,475,482 + -0.2 3,475,482 + +0.8 3,475,483 - +0.5 3,475,882 + -0.5 3,475,882 + +0.5 3,475,882 + -0.0 3,475,882 + -0.2 3,475,883 - -0.1 3,475,883 - +0.4 3,475,883 - +0.2 3,475,883 - -0.2 3,475,894 + +0.1 3,475,895 - -0.0 3,475,954 + -0.9 3,475,954 + +0.1 3,475,954 + -0.1 3,475,954 + -0.4 3,475,954 + +0.8 3,475,954 + +0.1 3,475,955 - -0.2 3,475,958 + +0.2 3,475,958 + +0.6 3,475,958 + -0.1 3,475,958 + +1.0 3,475,958 + +0.6 3,475,958 + +0.7 3,475,958 + -0.1 3,475,958 + +0.6 3,475,958 + -0.8 3,475,958 + -0.8 3,475,958 + +0.2 3,475,958 + +0.1 3,475,958 + -1.0 3,475,958 + +0.3 3,475,958 + -0.7 3,475,958 + -0.4 3,475,958 + -0.4 3,475,958 + +0.5 3,475,958 + -0.3 3,475,958 + -1.6 3,475,958 + +0.1 3,475,958 + -0.3 3,475,958 + -0.9 3,475,959 - -0.9 3,475,959 - -1.3 3,475,959 - +0.2 3,475,959 - +0.3 3,475,959 - -0.3 3,475,959 - +0.7 3,475,959 - -0.0 3,475,959 - +0.0 3,475,959 - -0.6 3,475,959 - -0.1 3,475,959 - -0.1 3,475,959 - +0.6 3,475,959 - +0.1 3,475,959 - +1.4 3,475,959 - +0.2 3,475,959 - -1.4 3,475,959 - +0.1 3,475,959 - -1.0 3,476,079 + +0.1 3,476,079 + +0.4 3,476,080 - -0.6 3,476,080 - +0.8 3,476,296 + -0.0 3,476,310 + +0.5 3,476,310 + +1.0 3,476,310 + -0.3 3,476,310 + -0.4 3,476,310 + -0.4 3,476,310 + -0.4 3,476,310 + -1.9 3,476,311 - -0.2 3,476,311 - +2.4 3,476,311 - +1.5 3,476,311 - -0.7 3,476,311 - +0.3 3,476,311 - +1.2 3,476,311 - -1.4 3,476,311 - +0.4 3,476,314 + -0.1 3,476,315 - +1.6 3,476,315 - +0.9 3,476,338 + +0.6 3,476,338 + +0.6 3,476,338 + +0.8 3,476,338 + +0.8 3,476,338 + +0.8 3,476,338 + -1.0 3,476,338 + +0.0 3,476,338 + +0.6 3,476,338 + -1.7 3,476,339 - -0.4 3,476,339 - +0.0 3,476,339 - -0.2 3,476,339 - +0.8 3,476,339 - +0.8 3,476,339 - -0.5 3,476,339 - +1.2 3,476,339 - +0.3 3,476,339 - +0.0 3,476,339 - +0.3 3,476,350 + +0.3 3,476,350 + +0.9 3,476,350 + -0.9 3,476,351 - -0.2 3,476,351 - +0.9 3,476,351 - +0.9 3,476,351 - +0.0 3,476,351 - -0.7 3,476,374 + -0.9 3,476,375 - +0.7 3,476,557 + AO356_15350 0.20 -0.7 3,477,305 + -0.2 3,477,305 + -0.2 3,477,305 + -0.3 3,477,305 + +0.1 3,477,305 + -0.1 3,477,305 + +0.3 3,477,305 + -0.8 3,477,305 + -0.3 3,477,306 - +0.0 3,477,306 - +0.9 3,477,306 - -0.8 3,477,435 + +0.6 3,477,560 + AO356_15355 0.10 -2.4 3,477,560 + AO356_15355 0.10 +1.2 3,477,560 + AO356_15355 0.10 -0.8 3,477,560 + AO356_15355 0.10 -0.4 3,477,560 + AO356_15355 0.10 -0.1 3,477,560 + AO356_15355 0.10 +0.2 3,477,560 + AO356_15355 0.10 +0.9 3,477,561 - AO356_15355 0.10 -0.1 3,477,642 - AO356_15355 0.16 +0.7 3,477,695 + AO356_15355 0.20 +0.1 3,477,696 - AO356_15355 0.20 +1.2 3,477,696 - AO356_15355 0.20 +0.4 3,477,713 + AO356_15355 0.22 +0.2 3,477,714 - AO356_15355 0.22 -0.8 3,477,714 - AO356_15355 0.22 -0.4 3,477,830 + AO356_15355 0.30 +0.2 3,477,830 + AO356_15355 0.30 +0.4 3,477,896 + AO356_15355 0.35 +0.1 3,477,896 + AO356_15355 0.35 +0.7 3,477,897 - AO356_15355 0.36 +0.3 3,477,897 - AO356_15355 0.36 +0.6 3,477,897 - AO356_15355 0.36 -0.8 3,478,053 + AO356_15355 0.47 -0.3 3,478,053 + AO356_15355 0.47 -0.4 3,478,053 + AO356_15355 0.47 -0.1 3,478,053 + AO356_15355 0.47 +0.5 3,478,053 + AO356_15355 0.47 -0.5 3,478,053 + AO356_15355 0.47 -0.6 3,478,053 + AO356_15355 0.47 -1.7 3,478,053 + AO356_15355 0.47 -0.3 3,478,053 + AO356_15355 0.47 +1.0 3,478,054 - AO356_15355 0.47 +0.4 3,478,054 - AO356_15355 0.47 +0.7 3,478,054 - AO356_15355 0.47 +0.5 3,478,054 - AO356_15355 0.47 -0.6 3,478,054 - AO356_15355 0.47 +0.9 3,478,054 - AO356_15355 0.47 +0.1 3,478,054 - AO356_15355 0.47 +0.5 3,478,054 - AO356_15355 0.47 -0.3 3,478,055 + AO356_15355 0.47 +0.2 3,478,055 + AO356_15355 0.47 -1.3 3,478,055 + AO356_15355 0.47 -0.4 3,478,055 + AO356_15355 0.47 -0.4 3,478,055 + AO356_15355 0.47 -0.2 3,478,055 + AO356_15355 0.47 -0.1 3,478,055 + AO356_15355 0.47 -0.8 3,478,055 + AO356_15355 0.47 -0.5 3,478,055 + AO356_15355 0.47 +0.1 3,478,055 + AO356_15355 0.47 -0.4 3,478,055 + AO356_15355 0.47 +0.1 3,478,055 + AO356_15355 0.47 -0.3 3,478,055 + AO356_15355 0.47 -0.6 3,478,055 + AO356_15355 0.47 -2.0 3,478,055 + AO356_15355 0.47 -0.4 3,478,055 + AO356_15355 0.47 -0.0 3,478,055 + AO356_15355 0.47 -0.1 3,478,055 + AO356_15355 0.47 -0.4 3,478,055 + AO356_15355 0.47 +1.8 3,478,055 + AO356_15355 0.47 -1.4 3,478,056 - AO356_15355 0.48 -0.8 3,478,056 - AO356_15355 0.48 +0.1 3,478,056 - AO356_15355 0.48 -0.4 3,478,056 - AO356_15355 0.48 -0.0 3,478,056 - AO356_15355 0.48 +0.3 3,478,056 - AO356_15355 0.48 +0.3 3,478,056 - AO356_15355 0.48 -1.1 3,478,056 - AO356_15355 0.48 -0.8 3,478,056 - AO356_15355 0.48 -0.2 3,478,056 - AO356_15355 0.48 +0.8 3,478,056 - AO356_15355 0.48 -0.2 3,478,056 - AO356_15355 0.48 +0.1 3,478,056 - AO356_15355 0.48 -0.1 3,478,056 - AO356_15355 0.48 -0.6 3,478,056 - AO356_15355 0.48 +1.1 3,478,056 - AO356_15355 0.48 -1.8 3,478,056 - AO356_15355 0.48 -0.5 3,478,196 + AO356_15355 0.58 +0.1
Or see this region's nucleotide sequence