Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_11965 and AO356_11970 are separated by 122 nucleotides AO356_11970 and AO356_11975 are separated by 279 nucleotides
AO356_11965: AO356_11965 - pyridoxamine kinase, at 2,711,328 to 2,712,200
_11965
AO356_11970: AO356_11970 - acyl-CoA hydrolase, at 2,712,323 to 2,712,808
_11970
AO356_11975: AO356_11975 - potassium transporter, at 2,713,088 to 2,714,851
_11975
Position (kb)
2712
2713 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2711.336 kb on + strand at 2711.336 kb on + strand at 2711.336 kb on + strand at 2711.337 kb on - strand at 2711.337 kb on - strand at 2711.337 kb on - strand at 2711.337 kb on - strand at 2711.337 kb on - strand at 2711.337 kb on - strand at 2711.445 kb on - strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.524 kb on + strand, within AO356_11965 at 2711.525 kb on - strand, within AO356_11965 at 2711.525 kb on - strand, within AO356_11965 at 2711.525 kb on - strand, within AO356_11965 at 2711.525 kb on - strand, within AO356_11965 at 2711.658 kb on + strand, within AO356_11965 at 2711.658 kb on + strand, within AO356_11965 at 2711.658 kb on + strand, within AO356_11965 at 2711.658 kb on + strand, within AO356_11965 at 2711.659 kb on - strand, within AO356_11965 at 2711.659 kb on - strand, within AO356_11965 at 2711.889 kb on + strand, within AO356_11965 at 2712.113 kb on + strand at 2712.120 kb on + strand at 2712.120 kb on + strand at 2712.324 kb on + strand at 2712.325 kb on - strand at 2712.526 kb on + strand, within AO356_11970 at 2712.576 kb on + strand, within AO356_11970 at 2712.576 kb on + strand, within AO356_11970 at 2712.576 kb on + strand, within AO356_11970 at 2712.576 kb on + strand, within AO356_11970 at 2712.576 kb on + strand, within AO356_11970 at 2712.577 kb on - strand, within AO356_11970 at 2712.577 kb on - strand, within AO356_11970 at 2712.577 kb on - strand, within AO356_11970 at 2712.663 kb on + strand, within AO356_11970 at 2712.664 kb on - strand, within AO356_11970 at 2712.664 kb on - strand, within AO356_11970 at 2712.693 kb on + strand, within AO356_11970 at 2712.694 kb on - strand, within AO356_11970 at 2712.694 kb on - strand, within AO356_11970 at 2712.711 kb on + strand, within AO356_11970 at 2712.711 kb on + strand, within AO356_11970 at 2712.711 kb on + strand, within AO356_11970 at 2712.711 kb on + strand, within AO356_11970 at 2712.711 kb on + strand, within AO356_11970 at 2712.712 kb on - strand, within AO356_11970 at 2712.813 kb on + strand at 2712.813 kb on + strand at 2712.813 kb on + strand at 2712.813 kb on + strand at 2712.813 kb on + strand at 2712.813 kb on + strand at 2712.813 kb on + strand at 2712.813 kb on + strand at 2712.813 kb on + strand at 2712.813 kb on + strand at 2712.813 kb on + strand at 2712.813 kb on + strand at 2712.814 kb on - strand at 2712.814 kb on - strand at 2712.814 kb on - strand at 2712.814 kb on - strand at 2712.814 kb on - strand at 2712.859 kb on + strand at 2712.860 kb on - strand at 2712.891 kb on + strand at 2712.891 kb on + strand at 2712.958 kb on + strand at 2712.958 kb on + strand at 2712.958 kb on + strand at 2712.958 kb on + strand at 2712.958 kb on + strand at 2712.958 kb on + strand at 2712.959 kb on - strand at 2712.959 kb on - strand at 2712.959 kb on - strand at 2712.960 kb on + strand at 2712.960 kb on + strand at 2712.960 kb on + strand at 2712.960 kb on + strand at 2712.960 kb on + strand at 2712.960 kb on + strand at 2712.960 kb on + strand at 2712.960 kb on + strand at 2712.960 kb on + strand at 2712.960 kb on + strand at 2712.960 kb on + strand at 2712.960 kb on + strand at 2712.960 kb on + strand at 2712.961 kb on - strand at 2712.961 kb on - strand at 2712.961 kb on - strand at 2712.961 kb on - strand at 2712.961 kb on - strand at 2712.961 kb on - strand at 2712.961 kb on - strand at 2712.961 kb on - strand at 2712.961 kb on - strand at 2712.961 kb on - strand at 2712.961 kb on - strand at 2712.961 kb on - strand at 2712.994 kb on + strand at 2713.027 kb on + strand at 2713.027 kb on + strand at 2713.028 kb on - strand at 2713.028 kb on - strand at 2713.028 kb on - strand at 2713.152 kb on + strand at 2713.152 kb on + strand at 2713.152 kb on + strand at 2713.152 kb on + strand at 2713.152 kb on + strand at 2713.152 kb on + strand at 2713.153 kb on - strand at 2713.153 kb on - strand at 2713.153 kb on - strand at 2713.153 kb on - strand at 2713.153 kb on - strand at 2713.182 kb on + strand at 2713.190 kb on + strand at 2713.190 kb on + strand at 2713.191 kb on - strand at 2713.191 kb on - strand at 2713.191 kb on - strand at 2713.191 kb on - strand at 2713.241 kb on - strand at 2713.718 kb on + strand, within AO356_11975 at 2713.718 kb on + strand, within AO356_11975 at 2713.761 kb on + strand, within AO356_11975 at 2713.808 kb on + strand, within AO356_11975 at 2713.808 kb on + strand, within AO356_11975 at 2713.808 kb on + strand, within AO356_11975 at 2713.808 kb on + strand, within AO356_11975 at 2713.808 kb on + strand, within AO356_11975 at 2713.808 kb on + strand, within AO356_11975 at 2713.808 kb on + strand, within AO356_11975 at 2713.808 kb on + strand, within AO356_11975 at 2713.808 kb on + strand, within AO356_11975
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 2,711,336 + -0.5 2,711,336 + -1.4 2,711,336 + +0.2 2,711,337 - +1.5 2,711,337 - +0.3 2,711,337 - -0.2 2,711,337 - -0.5 2,711,337 - +0.2 2,711,337 - +1.8 2,711,445 - AO356_11965 0.13 +0.9 2,711,524 + AO356_11965 0.22 -0.1 2,711,524 + AO356_11965 0.22 +0.3 2,711,524 + AO356_11965 0.22 +0.4 2,711,524 + AO356_11965 0.22 -1.1 2,711,524 + AO356_11965 0.22 +0.3 2,711,524 + AO356_11965 0.22 +0.5 2,711,524 + AO356_11965 0.22 -0.6 2,711,524 + AO356_11965 0.22 +0.4 2,711,524 + AO356_11965 0.22 +1.3 2,711,524 + AO356_11965 0.22 +0.9 2,711,524 + AO356_11965 0.22 -0.3 2,711,524 + AO356_11965 0.22 +0.3 2,711,524 + AO356_11965 0.22 -1.6 2,711,524 + AO356_11965 0.22 +1.5 2,711,524 + AO356_11965 0.22 -0.3 2,711,525 - AO356_11965 0.23 -0.3 2,711,525 - AO356_11965 0.23 +1.0 2,711,525 - AO356_11965 0.23 +0.9 2,711,525 - AO356_11965 0.23 +0.7 2,711,658 + AO356_11965 0.38 -0.5 2,711,658 + AO356_11965 0.38 +0.4 2,711,658 + AO356_11965 0.38 +0.2 2,711,658 + AO356_11965 0.38 -0.1 2,711,659 - AO356_11965 0.38 +0.5 2,711,659 - AO356_11965 0.38 -0.4 2,711,889 + AO356_11965 0.64 -0.9 2,712,113 + -0.3 2,712,120 + +0.8 2,712,120 + -0.2 2,712,324 + -0.4 2,712,325 - -1.3 2,712,526 + AO356_11970 0.42 +0.5 2,712,576 + AO356_11970 0.52 +0.2 2,712,576 + AO356_11970 0.52 -0.6 2,712,576 + AO356_11970 0.52 +0.1 2,712,576 + AO356_11970 0.52 +0.9 2,712,576 + AO356_11970 0.52 +0.5 2,712,577 - AO356_11970 0.52 +0.7 2,712,577 - AO356_11970 0.52 +0.6 2,712,577 - AO356_11970 0.52 +1.0 2,712,663 + AO356_11970 0.70 +0.5 2,712,664 - AO356_11970 0.70 +0.4 2,712,664 - AO356_11970 0.70 -0.1 2,712,693 + AO356_11970 0.76 -0.1 2,712,694 - AO356_11970 0.76 +0.5 2,712,694 - AO356_11970 0.76 -1.7 2,712,711 + AO356_11970 0.80 +1.1 2,712,711 + AO356_11970 0.80 -0.1 2,712,711 + AO356_11970 0.80 -0.6 2,712,711 + AO356_11970 0.80 +0.3 2,712,711 + AO356_11970 0.80 +0.8 2,712,712 - AO356_11970 0.80 -0.1 2,712,813 + -0.7 2,712,813 + +0.5 2,712,813 + +0.8 2,712,813 + -0.4 2,712,813 + +2.5 2,712,813 + +1.1 2,712,813 + -0.4 2,712,813 + -1.3 2,712,813 + +0.2 2,712,813 + -0.4 2,712,813 + +1.1 2,712,813 + -0.8 2,712,814 - -0.5 2,712,814 - -0.6 2,712,814 - -1.2 2,712,814 - +0.8 2,712,814 - -0.6 2,712,859 + +2.9 2,712,860 - -0.2 2,712,891 + +0.9 2,712,891 + +0.2 2,712,958 + +0.6 2,712,958 + +1.1 2,712,958 + +0.2 2,712,958 + -0.2 2,712,958 + +1.2 2,712,958 + -0.6 2,712,959 - -0.5 2,712,959 - -0.4 2,712,959 - +0.9 2,712,960 + -0.6 2,712,960 + +0.7 2,712,960 + +0.6 2,712,960 + +0.0 2,712,960 + -0.4 2,712,960 + +0.7 2,712,960 + +0.5 2,712,960 + -0.4 2,712,960 + +0.3 2,712,960 + +0.5 2,712,960 + -0.0 2,712,960 + +0.2 2,712,960 + +1.0 2,712,961 - -0.3 2,712,961 - -0.6 2,712,961 - +0.8 2,712,961 - +1.0 2,712,961 - -0.3 2,712,961 - +0.2 2,712,961 - +0.1 2,712,961 - -0.8 2,712,961 - -0.3 2,712,961 - -0.2 2,712,961 - +0.2 2,712,961 - -0.5 2,712,994 + +0.5 2,713,027 + +0.9 2,713,027 + -0.2 2,713,028 - -0.6 2,713,028 - +2.2 2,713,028 - +0.3 2,713,152 + +0.2 2,713,152 + +0.2 2,713,152 + -1.2 2,713,152 + +0.6 2,713,152 + -0.1 2,713,152 + +0.6 2,713,153 - -1.1 2,713,153 - -0.4 2,713,153 - +0.4 2,713,153 - -0.1 2,713,153 - -0.1 2,713,182 + +0.2 2,713,190 + +0.1 2,713,190 + -0.1 2,713,191 - +0.1 2,713,191 - -0.0 2,713,191 - -0.1 2,713,191 - -0.5 2,713,241 - +0.6 2,713,718 + AO356_11975 0.36 -0.2 2,713,718 + AO356_11975 0.36 +1.1 2,713,761 + AO356_11975 0.38 +0.2 2,713,808 + AO356_11975 0.41 +0.4 2,713,808 + AO356_11975 0.41 +0.1 2,713,808 + AO356_11975 0.41 +0.2 2,713,808 + AO356_11975 0.41 +0.7 2,713,808 + AO356_11975 0.41 +0.3 2,713,808 + AO356_11975 0.41 +0.1 2,713,808 + AO356_11975 0.41 -0.5 2,713,808 + AO356_11975 0.41 -2.1 2,713,808 + AO356_11975 0.41 -0.2
Or see this region's nucleotide sequence