Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04143 and SMc04142 are separated by 274 nucleotides SMc04142 and SMc04141 are separated by 20 nucleotides SMc04141 and SMc04140 overlap by 4 nucleotides
SMc04143: SMc04143 - transcriptional regulator, at 128,940 to 129,662
SMc04143
SMc04142: SMc04142 - hypothetical protein, at 129,937 to 130,821
SMc04142
SMc04141: SMc04141 - glutathione S-transferase, at 130,842 to 131,483
SMc04141
SMc04140: SMc04140 - ABC transporter ATP-binding protein, at 131,480 to 132,562
SMc04140
Position (kb) 129
130
131 Strain fitness (log2 ratio) -1
0
1 at 128.950 kb on + strand at 128.950 kb on + strand at 128.951 kb on - strand at 128.951 kb on - strand at 128.951 kb on - strand at 128.951 kb on - strand at 129.000 kb on + strand at 129.000 kb on + strand at 129.001 kb on - strand at 129.072 kb on - strand, within SMc04143 at 129.161 kb on + strand, within SMc04143 at 129.234 kb on + strand, within SMc04143 at 129.235 kb on - strand, within SMc04143 at 129.317 kb on - strand, within SMc04143 at 129.558 kb on + strand, within SMc04143 at 129.558 kb on + strand, within SMc04143 at 129.559 kb on - strand, within SMc04143 at 129.559 kb on - strand, within SMc04143 at 129.559 kb on - strand, within SMc04143 at 129.610 kb on - strand at 129.882 kb on + strand at 129.895 kb on - strand at 131.082 kb on - strand, within SMc04141 at 131.138 kb on - strand, within SMc04141 at 131.470 kb on + strand at 131.471 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 128,950 + -0.6 128,950 + -0.2 128,951 - +1.0 128,951 - -0.4 128,951 - -0.7 128,951 - -0.7 129,000 + -0.1 129,000 + -0.2 129,001 - +0.1 129,072 - SMc04143 0.18 -1.0 129,161 + SMc04143 0.31 -0.4 129,234 + SMc04143 0.41 +0.7 129,235 - SMc04143 0.41 +0.0 129,317 - SMc04143 0.52 -0.0 129,558 + SMc04143 0.85 +0.3 129,558 + SMc04143 0.85 -0.0 129,559 - SMc04143 0.86 -0.3 129,559 - SMc04143 0.86 +0.0 129,559 - SMc04143 0.86 +0.9 129,610 - -0.0 129,882 + -0.8 129,895 - +0.2 131,082 - SMc04141 0.37 +0.2 131,138 - SMc04141 0.46 -0.1 131,470 + +0.4 131,471 - -0.1
Or see this region's nucleotide sequence