Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02467 and SMc02466 are separated by 150 nucleotides SMc02466 and SMc02465 are separated by 18 nucleotides SMc02465 and SMc02464 are separated by 7 nucleotides SMc02464 and SMc02463 are separated by 10 nucleotides
SMc02467: SMc02467 - peptide methionine sulfoxide reductase, at 3,330,083 to 3,330,679
SMc02467
SMc02466: SMc02466 - succinate dehydrogenase iron-sulfur subunit, at 3,330,830 to 3,331,609
SMc02466
SMc02465: SMc02465 - succinate dehydrogenase flavoprotein subunit, at 3,331,628 to 3,333,469
SMc02465
SMc02464: SMc02464 - succinate dehydrogenase membrane anchor subunit protein, at 3,333,477 to 3,333,857
SMc02464
SMc02463: SMc02463 - succinate dehydrogenase cytochrome B-556 subunit transmembrane protein, at 3,333,868 to 3,334,260
SMc02463
Position (kb)
3331
3332
3333
3334 Strain fitness (log2 ratio)
-2
-1
0
1 at 3330.701 kb on + strand at 3330.705 kb on - strand at 3330.709 kb on - strand at 3330.709 kb on - strand at 3330.709 kb on - strand at 3330.709 kb on - strand at 3330.739 kb on - strand at 3330.739 kb on - strand at 3333.479 kb on - strand at 3334.366 kb on - strand at 3334.462 kb on - strand at 3334.462 kb on - strand at 3334.468 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 3,330,701 + +0.3 3,330,705 - -1.0 3,330,709 - -0.9 3,330,709 - +0.0 3,330,709 - -2.6 3,330,709 - -0.2 3,330,739 - -0.6 3,330,739 - -0.6 3,333,479 - +0.1 3,334,366 - +0.6 3,334,462 - -0.2 3,334,462 - +0.8 3,334,468 - -0.7
Or see this region's nucleotide sequence