Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00742 and SMc00741 are separated by 15 nucleotides SMc00741 and SMc00740 are separated by 204 nucleotides SMc00740 and SMc00739 overlap by 1 nucleotides
SMc00742: SMc00742 - hypothetical protein, at 2,839,575 to 2,840,846
SMc00742
SMc00741: SMc00741 - fatty-acid-CoA ligase, at 2,840,862 to 2,842,508
SMc00741
SMc00740: SMc00740 - hypothetical protein, at 2,842,713 to 2,842,997
SMc00740
SMc00739: SMc00739 - hypothetical protein, at 2,842,997 to 2,843,479
SMc00739
Position (kb)
2840
2841
2842
2843 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2840.977 kb on + strand at 2841.067 kb on + strand, within SMc00741 at 2841.067 kb on + strand, within SMc00741 at 2841.067 kb on + strand, within SMc00741 at 2841.067 kb on + strand, within SMc00741 at 2841.068 kb on - strand, within SMc00741 at 2841.068 kb on - strand, within SMc00741 at 2841.068 kb on - strand, within SMc00741 at 2841.068 kb on - strand, within SMc00741 at 2841.068 kb on - strand, within SMc00741 at 2841.179 kb on - strand, within SMc00741 at 2841.226 kb on + strand, within SMc00741 at 2841.226 kb on + strand, within SMc00741 at 2841.279 kb on - strand, within SMc00741 at 2841.313 kb on + strand, within SMc00741 at 2841.483 kb on - strand, within SMc00741 at 2841.502 kb on + strand, within SMc00741 at 2841.934 kb on + strand, within SMc00741 at 2841.935 kb on - strand, within SMc00741 at 2841.935 kb on - strand, within SMc00741 at 2842.055 kb on + strand, within SMc00741 at 2842.056 kb on - strand, within SMc00741 at 2842.210 kb on + strand, within SMc00741 at 2842.210 kb on + strand, within SMc00741 at 2842.211 kb on - strand, within SMc00741 at 2842.211 kb on - strand, within SMc00741 at 2842.340 kb on - strand, within SMc00741 at 2842.340 kb on - strand, within SMc00741 at 2842.474 kb on + strand at 2842.542 kb on + strand at 2842.543 kb on - strand at 2842.673 kb on + strand at 2842.682 kb on - strand at 2842.686 kb on + strand at 2842.687 kb on - strand at 2842.687 kb on - strand at 2842.687 kb on - strand at 2842.777 kb on + strand, within SMc00740 at 2842.777 kb on + strand, within SMc00740 at 2842.778 kb on - strand, within SMc00740 at 2842.778 kb on - strand, within SMc00740 at 2842.918 kb on - strand, within SMc00740 at 2842.918 kb on - strand, within SMc00740 at 2843.037 kb on + strand at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.127 kb on - strand, within SMc00739 at 2843.127 kb on - strand, within SMc00739 at 2843.132 kb on - strand, within SMc00739 at 2843.162 kb on + strand, within SMc00739 at 2843.163 kb on - strand, within SMc00739 at 2843.163 kb on - strand, within SMc00739 at 2843.264 kb on - strand, within SMc00739
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 2,840,977 + +0.1 2,841,067 + SMc00741 0.12 -0.4 2,841,067 + SMc00741 0.12 -0.1 2,841,067 + SMc00741 0.12 -0.2 2,841,067 + SMc00741 0.12 -0.2 2,841,068 - SMc00741 0.13 -0.7 2,841,068 - SMc00741 0.13 -0.5 2,841,068 - SMc00741 0.13 -0.0 2,841,068 - SMc00741 0.13 -0.7 2,841,068 - SMc00741 0.13 -0.3 2,841,179 - SMc00741 0.19 +0.0 2,841,226 + SMc00741 0.22 -0.1 2,841,226 + SMc00741 0.22 -0.5 2,841,279 - SMc00741 0.25 -1.2 2,841,313 + SMc00741 0.27 -0.0 2,841,483 - SMc00741 0.38 +0.0 2,841,502 + SMc00741 0.39 -1.8 2,841,934 + SMc00741 0.65 -0.4 2,841,935 - SMc00741 0.65 -0.1 2,841,935 - SMc00741 0.65 -0.4 2,842,055 + SMc00741 0.72 -0.1 2,842,056 - SMc00741 0.72 -0.9 2,842,210 + SMc00741 0.82 -1.1 2,842,210 + SMc00741 0.82 +2.4 2,842,211 - SMc00741 0.82 -0.4 2,842,211 - SMc00741 0.82 -0.3 2,842,340 - SMc00741 0.90 +1.0 2,842,340 - SMc00741 0.90 -0.2 2,842,474 + -0.2 2,842,542 + -0.3 2,842,543 - -0.7 2,842,673 + +0.4 2,842,682 - +0.0 2,842,686 + -0.0 2,842,687 - +0.4 2,842,687 - -1.3 2,842,687 - +0.6 2,842,777 + SMc00740 0.22 -2.9 2,842,777 + SMc00740 0.22 -0.2 2,842,778 - SMc00740 0.23 -0.2 2,842,778 - SMc00740 0.23 -0.6 2,842,918 - SMc00740 0.72 -0.8 2,842,918 - SMc00740 0.72 +0.3 2,843,037 + +2.2 2,843,126 + SMc00739 0.27 +0.3 2,843,126 + SMc00739 0.27 -0.1 2,843,126 + SMc00739 0.27 +0.1 2,843,126 + SMc00739 0.27 -0.3 2,843,126 + SMc00739 0.27 -0.2 2,843,126 + SMc00739 0.27 -0.3 2,843,127 - SMc00739 0.27 -0.3 2,843,127 - SMc00739 0.27 -0.2 2,843,132 - SMc00739 0.28 +0.2 2,843,162 + SMc00739 0.34 -0.2 2,843,163 - SMc00739 0.34 -0.8 2,843,163 - SMc00739 0.34 -0.2 2,843,264 - SMc00739 0.55 +0.1
Or see this region's nucleotide sequence