Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00728 and SMc00727 are separated by 143 nucleotides SMc00727 and SMc00726 are separated by 37 nucleotides SMc00726 and SMc00725 are separated by 25 nucleotides
SMc00728: SMc00728 - electron transfer flavoprotein alpha-subunit alpha-ETF flavoprotein, at 2,851,560 to 2,852,489
SMc00728
SMc00727: SMc00727 - 3-hydroxybutyryl-CoA dehydrogenase, at 2,852,633 to 2,853,505
SMc00727
SMc00726: SMc00726 - thiol:disulfide interchange redox-active center transmembrane protein, at 2,853,543 to 2,854,217
SMc00726
SMc00725: SMc00725 - argininosuccinate lyase, at 2,854,243 to 2,855,646
SMc00725
Position (kb)
2852
2853
2854 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2852.539 kb on + strand at 2852.708 kb on + strand at 2852.708 kb on + strand at 2852.709 kb on - strand at 2852.709 kb on - strand at 2852.710 kb on + strand at 2852.711 kb on - strand at 2852.711 kb on - strand at 2852.724 kb on - strand, within SMc00727 at 2852.930 kb on + strand, within SMc00727 at 2852.965 kb on + strand, within SMc00727 at 2852.965 kb on + strand, within SMc00727 at 2852.965 kb on + strand, within SMc00727 at 2852.965 kb on + strand, within SMc00727 at 2853.090 kb on + strand, within SMc00727 at 2853.091 kb on - strand, within SMc00727 at 2853.234 kb on - strand, within SMc00727 at 2853.242 kb on + strand, within SMc00727 at 2853.242 kb on + strand, within SMc00727 at 2853.242 kb on + strand, within SMc00727 at 2853.243 kb on - strand, within SMc00727 at 2853.285 kb on - strand, within SMc00727 at 2853.395 kb on + strand, within SMc00727 at 2853.396 kb on - strand, within SMc00727 at 2853.396 kb on - strand, within SMc00727 at 2853.422 kb on + strand at 2853.423 kb on - strand at 2853.467 kb on + strand at 2853.467 kb on + strand at 2853.468 kb on - strand at 2853.468 kb on - strand at 2853.468 kb on - strand at 2854.129 kb on + strand, within SMc00726 at 2854.331 kb on + strand at 2854.331 kb on + strand at 2854.331 kb on + strand at 2854.332 kb on - strand at 2854.332 kb on - strand at 2854.332 kb on - strand at 2854.388 kb on + strand, within SMc00725
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 2,852,539 + -2.6 2,852,708 + -1.7 2,852,708 + -0.7 2,852,709 - +0.1 2,852,709 - -0.7 2,852,710 + -0.4 2,852,711 - -0.6 2,852,711 - -0.1 2,852,724 - SMc00727 0.10 -0.6 2,852,930 + SMc00727 0.34 -0.3 2,852,965 + SMc00727 0.38 -0.3 2,852,965 + SMc00727 0.38 -0.7 2,852,965 + SMc00727 0.38 -0.6 2,852,965 + SMc00727 0.38 -0.7 2,853,090 + SMc00727 0.52 -1.2 2,853,091 - SMc00727 0.52 -1.6 2,853,234 - SMc00727 0.69 -1.4 2,853,242 + SMc00727 0.70 -0.6 2,853,242 + SMc00727 0.70 -0.1 2,853,242 + SMc00727 0.70 -0.8 2,853,243 - SMc00727 0.70 -0.6 2,853,285 - SMc00727 0.75 -0.7 2,853,395 + SMc00727 0.87 -0.2 2,853,396 - SMc00727 0.87 -2.2 2,853,396 - SMc00727 0.87 -1.2 2,853,422 + -0.6 2,853,423 - +0.7 2,853,467 + +0.2 2,853,467 + -0.8 2,853,468 - -0.1 2,853,468 - -1.1 2,853,468 - -1.1 2,854,129 + SMc00726 0.87 -3.7 2,854,331 + +0.6 2,854,331 + +0.3 2,854,331 + +0.3 2,854,332 - -0.2 2,854,332 - +1.7 2,854,332 - -0.7 2,854,388 + SMc00725 0.10 +0.0
Or see this region's nucleotide sequence