Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00261 and SMc00262 overlap by 4 nucleotides SMc00262 and SMc00263 overlap by 4 nucleotides SMc00263 and SMc00264 are separated by 3 nucleotides
SMc00261: SMc00261 - acyl-CoA synthetase, at 1,828,787 to 1,830,436
SMc00261
SMc00262: SMc00262 - acetyl-CoA acetyltransferase, at 1,830,433 to 1,831,602
SMc00262
SMc00263: SMc00263 - transcriptional regulator, at 1,831,599 to 1,832,447
SMc00263
SMc00264: SMc00264 - oxidoreductase, at 1,832,451 to 1,833,254
SMc00264
Position (kb)
1830
1831
1832 Strain fitness (log2 ratio)
-1
0
1 at 1829.469 kb on + strand, within SMc00261 at 1829.523 kb on + strand, within SMc00261 at 1829.523 kb on + strand, within SMc00261 at 1829.541 kb on + strand, within SMc00261 at 1829.541 kb on + strand, within SMc00261 at 1829.541 kb on + strand, within SMc00261 at 1829.542 kb on - strand, within SMc00261 at 1829.542 kb on - strand, within SMc00261 at 1829.550 kb on + strand, within SMc00261 at 1829.551 kb on - strand, within SMc00261 at 1829.572 kb on - strand, within SMc00261 at 1829.606 kb on + strand, within SMc00261 at 1829.606 kb on + strand, within SMc00261 at 1829.606 kb on + strand, within SMc00261 at 1829.607 kb on - strand, within SMc00261 at 1829.611 kb on + strand, within SMc00261 at 1829.654 kb on + strand, within SMc00261 at 1829.655 kb on - strand, within SMc00261 at 1829.890 kb on + strand, within SMc00261 at 1829.891 kb on - strand, within SMc00261 at 1829.892 kb on + strand, within SMc00261 at 1829.893 kb on - strand, within SMc00261 at 1829.893 kb on - strand, within SMc00261 at 1829.893 kb on - strand, within SMc00261 at 1829.898 kb on + strand, within SMc00261 at 1829.899 kb on - strand, within SMc00261 at 1830.074 kb on + strand, within SMc00261 at 1830.075 kb on - strand, within SMc00261 at 1830.108 kb on + strand, within SMc00261 at 1830.109 kb on - strand at 1830.113 kb on + strand, within SMc00261 at 1830.114 kb on - strand, within SMc00261 at 1830.236 kb on - strand, within SMc00261 at 1830.265 kb on - strand, within SMc00261 at 1830.265 kb on - strand, within SMc00261 at 1830.461 kb on + strand at 1830.461 kb on + strand at 1830.461 kb on + strand at 1830.462 kb on - strand at 1830.462 kb on - strand at 1830.462 kb on - strand at 1830.543 kb on + strand at 1830.677 kb on + strand, within SMc00262 at 1830.678 kb on - strand, within SMc00262 at 1830.713 kb on + strand, within SMc00262 at 1830.730 kb on + strand, within SMc00262 at 1830.731 kb on - strand, within SMc00262 at 1830.958 kb on + strand, within SMc00262 at 1830.958 kb on + strand, within SMc00262 at 1831.053 kb on + strand, within SMc00262 at 1831.073 kb on - strand, within SMc00262 at 1831.142 kb on + strand, within SMc00262 at 1831.142 kb on + strand, within SMc00262 at 1831.142 kb on + strand, within SMc00262 at 1831.142 kb on + strand, within SMc00262 at 1831.142 kb on + strand, within SMc00262 at 1831.142 kb on + strand, within SMc00262 at 1831.142 kb on + strand, within SMc00262 at 1831.143 kb on - strand, within SMc00262 at 1831.143 kb on - strand, within SMc00262 at 1831.143 kb on - strand, within SMc00262 at 1831.143 kb on - strand, within SMc00262 at 1831.143 kb on - strand, within SMc00262 at 1831.209 kb on - strand, within SMc00262 at 1831.209 kb on - strand, within SMc00262 at 1831.323 kb on + strand, within SMc00262 at 1831.324 kb on - strand, within SMc00262 at 1831.325 kb on + strand, within SMc00262 at 1831.325 kb on + strand, within SMc00262 at 1831.326 kb on - strand, within SMc00262 at 1831.582 kb on + strand at 1831.583 kb on - strand at 1831.583 kb on - strand at 1831.641 kb on + strand at 1831.641 kb on + strand at 1831.641 kb on + strand at 1831.641 kb on + strand at 1831.642 kb on - strand at 1831.642 kb on - strand at 1831.642 kb on - strand at 1831.642 kb on - strand at 1831.642 kb on - strand at 1831.842 kb on - strand, within SMc00263 at 1832.218 kb on + strand, within SMc00263 at 1832.218 kb on + strand, within SMc00263 at 1832.219 kb on - strand, within SMc00263 at 1832.235 kb on - strand, within SMc00263 at 1832.236 kb on + strand, within SMc00263 at 1832.236 kb on + strand, within SMc00263 at 1832.237 kb on - strand, within SMc00263 at 1832.237 kb on - strand, within SMc00263 at 1832.237 kb on - strand, within SMc00263 at 1832.237 kb on - strand, within SMc00263 at 1832.240 kb on - strand, within SMc00263 at 1832.309 kb on + strand, within SMc00263 at 1832.457 kb on + strand at 1832.457 kb on + strand at 1832.458 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 1,829,469 + SMc00261 0.41 +0.1 1,829,523 + SMc00261 0.45 +0.6 1,829,523 + SMc00261 0.45 -0.6 1,829,541 + SMc00261 0.46 -0.1 1,829,541 + SMc00261 0.46 -0.3 1,829,541 + SMc00261 0.46 -0.7 1,829,542 - SMc00261 0.46 +0.2 1,829,542 - SMc00261 0.46 +0.2 1,829,550 + SMc00261 0.46 -0.1 1,829,551 - SMc00261 0.46 +0.2 1,829,572 - SMc00261 0.48 -1.0 1,829,606 + SMc00261 0.50 +0.2 1,829,606 + SMc00261 0.50 -0.0 1,829,606 + SMc00261 0.50 -0.1 1,829,607 - SMc00261 0.50 +0.0 1,829,611 + SMc00261 0.50 +0.1 1,829,654 + SMc00261 0.53 -0.4 1,829,655 - SMc00261 0.53 +0.1 1,829,890 + SMc00261 0.67 +0.2 1,829,891 - SMc00261 0.67 -0.3 1,829,892 + SMc00261 0.67 -0.2 1,829,893 - SMc00261 0.67 +0.3 1,829,893 - SMc00261 0.67 -0.7 1,829,893 - SMc00261 0.67 -0.3 1,829,898 + SMc00261 0.67 -0.3 1,829,899 - SMc00261 0.67 -0.9 1,830,074 + SMc00261 0.78 +0.1 1,830,075 - SMc00261 0.78 -1.4 1,830,108 + SMc00261 0.80 -0.1 1,830,109 - -0.7 1,830,113 + SMc00261 0.80 +0.4 1,830,114 - SMc00261 0.80 -0.4 1,830,236 - SMc00261 0.88 -0.7 1,830,265 - SMc00261 0.90 -0.4 1,830,265 - SMc00261 0.90 +0.3 1,830,461 + +0.2 1,830,461 + +0.6 1,830,461 + -0.1 1,830,462 - +0.4 1,830,462 - +1.0 1,830,462 - -0.4 1,830,543 + +0.2 1,830,677 + SMc00262 0.21 -0.3 1,830,678 - SMc00262 0.21 +0.0 1,830,713 + SMc00262 0.24 -0.2 1,830,730 + SMc00262 0.25 +0.1 1,830,731 - SMc00262 0.25 -0.2 1,830,958 + SMc00262 0.45 -0.5 1,830,958 + SMc00262 0.45 -0.1 1,831,053 + SMc00262 0.53 -0.5 1,831,073 - SMc00262 0.55 +0.4 1,831,142 + SMc00262 0.61 -0.3 1,831,142 + SMc00262 0.61 +0.4 1,831,142 + SMc00262 0.61 -0.3 1,831,142 + SMc00262 0.61 -0.3 1,831,142 + SMc00262 0.61 +0.5 1,831,142 + SMc00262 0.61 -0.6 1,831,142 + SMc00262 0.61 +0.2 1,831,143 - SMc00262 0.61 -0.2 1,831,143 - SMc00262 0.61 -0.5 1,831,143 - SMc00262 0.61 -0.6 1,831,143 - SMc00262 0.61 -0.6 1,831,143 - SMc00262 0.61 +0.3 1,831,209 - SMc00262 0.66 +0.5 1,831,209 - SMc00262 0.66 +0.1 1,831,323 + SMc00262 0.76 +0.1 1,831,324 - SMc00262 0.76 +0.6 1,831,325 + SMc00262 0.76 -0.3 1,831,325 + SMc00262 0.76 +0.2 1,831,326 - SMc00262 0.76 -0.1 1,831,582 + +0.9 1,831,583 - -0.6 1,831,583 - -0.2 1,831,641 + -1.1 1,831,641 + +0.2 1,831,641 + +0.2 1,831,641 + -0.7 1,831,642 - -0.7 1,831,642 - +0.2 1,831,642 - -0.4 1,831,642 - -1.2 1,831,642 - -0.0 1,831,842 - SMc00263 0.29 -0.8 1,832,218 + SMc00263 0.73 -0.5 1,832,218 + SMc00263 0.73 -0.1 1,832,219 - SMc00263 0.73 +0.6 1,832,235 - SMc00263 0.75 +0.3 1,832,236 + SMc00263 0.75 +0.6 1,832,236 + SMc00263 0.75 -0.0 1,832,237 - SMc00263 0.75 -0.4 1,832,237 - SMc00263 0.75 -0.2 1,832,237 - SMc00263 0.75 -0.0 1,832,237 - SMc00263 0.75 +0.9 1,832,240 - SMc00263 0.76 +0.1 1,832,309 + SMc00263 0.84 -0.2 1,832,457 + +1.2 1,832,457 + +0.7 1,832,458 - -0.3
Or see this region's nucleotide sequence