Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2353 and SMa2355 are separated by 183 nucleotides
SMa2353: SMa2353 - oxidoreductase, at 1,324,660 to 1,326,858
SMa2353
SMa2355: SMa2355 - DNA polymerase IV, at 1,327,042 to 1,328,151
SMa2355
Position (kb)
1327
1328
1329 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1326.048 kb on + strand, within SMa2353 at 1326.048 kb on + strand, within SMa2353 at 1326.049 kb on - strand, within SMa2353 at 1326.073 kb on + strand, within SMa2353 at 1326.074 kb on - strand, within SMa2353 at 1326.074 kb on - strand, within SMa2353 at 1326.212 kb on + strand, within SMa2353 at 1326.212 kb on + strand, within SMa2353 at 1326.213 kb on - strand, within SMa2353 at 1326.214 kb on + strand, within SMa2353 at 1326.635 kb on - strand, within SMa2353 at 1326.774 kb on + strand at 1326.778 kb on + strand at 1326.778 kb on + strand at 1326.778 kb on + strand at 1326.778 kb on + strand at 1326.778 kb on + strand at 1326.778 kb on + strand at 1326.778 kb on + strand at 1326.779 kb on - strand at 1326.779 kb on - strand at 1326.779 kb on - strand at 1326.794 kb on + strand at 1326.795 kb on - strand at 1326.866 kb on - strand at 1326.866 kb on - strand at 1326.961 kb on - strand at 1326.961 kb on - strand at 1326.983 kb on + strand at 1326.984 kb on - strand at 1326.998 kb on + strand at 1326.999 kb on - strand at 1327.219 kb on + strand, within SMa2355 at 1327.220 kb on - strand, within SMa2355 at 1327.318 kb on + strand, within SMa2355 at 1327.361 kb on - strand, within SMa2355 at 1327.361 kb on - strand, within SMa2355 at 1327.399 kb on + strand, within SMa2355 at 1327.513 kb on + strand, within SMa2355 at 1327.514 kb on - strand, within SMa2355 at 1327.744 kb on + strand, within SMa2355 at 1327.745 kb on - strand, within SMa2355 at 1327.779 kb on + strand, within SMa2355 at 1327.825 kb on - strand, within SMa2355 at 1327.825 kb on - strand, within SMa2355 at 1328.249 kb on + strand at 1328.249 kb on + strand at 1328.334 kb on + strand at 1328.342 kb on + strand at 1328.343 kb on - strand at 1328.343 kb on - strand at 1328.345 kb on - strand at 1328.345 kb on - strand at 1328.345 kb on - strand at 1328.345 kb on - strand at 1328.345 kb on - strand at 1328.662 kb on - strand at 1328.673 kb on + strand at 1328.673 kb on + strand at 1328.693 kb on + strand at 1328.694 kb on - strand at 1328.742 kb on + strand at 1328.743 kb on - strand at 1328.763 kb on - strand at 1329.024 kb on + strand at 1329.024 kb on + strand at 1329.024 kb on + strand at 1329.025 kb on - strand at 1329.025 kb on - strand at 1329.025 kb on - strand at 1329.035 kb on - strand at 1329.049 kb on + strand at 1329.142 kb on + strand at 1329.143 kb on - strand at 1329.143 kb on - strand at 1329.143 kb on - strand at 1329.143 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 1,326,048 + SMa2353 0.63 -0.5 1,326,048 + SMa2353 0.63 -0.1 1,326,049 - SMa2353 0.63 +0.3 1,326,073 + SMa2353 0.64 -0.0 1,326,074 - SMa2353 0.64 -0.6 1,326,074 - SMa2353 0.64 -0.2 1,326,212 + SMa2353 0.71 -0.7 1,326,212 + SMa2353 0.71 +0.1 1,326,213 - SMa2353 0.71 -0.5 1,326,214 + SMa2353 0.71 -0.0 1,326,635 - SMa2353 0.90 +0.4 1,326,774 + -0.7 1,326,778 + -3.4 1,326,778 + +0.2 1,326,778 + -0.2 1,326,778 + +0.1 1,326,778 + +0.6 1,326,778 + -0.7 1,326,778 + +0.4 1,326,779 - +0.8 1,326,779 - +0.9 1,326,779 - +0.2 1,326,794 + -0.1 1,326,795 - -1.5 1,326,866 - -0.5 1,326,866 - -0.3 1,326,961 - +1.3 1,326,961 - -0.0 1,326,983 + -0.2 1,326,984 - -0.8 1,326,998 + -1.2 1,326,999 - +0.5 1,327,219 + SMa2355 0.16 -0.1 1,327,220 - SMa2355 0.16 +0.3 1,327,318 + SMa2355 0.25 +0.4 1,327,361 - SMa2355 0.29 +0.2 1,327,361 - SMa2355 0.29 +0.8 1,327,399 + SMa2355 0.32 +0.4 1,327,513 + SMa2355 0.42 +0.8 1,327,514 - SMa2355 0.43 +0.4 1,327,744 + SMa2355 0.63 +0.6 1,327,745 - SMa2355 0.63 +0.9 1,327,779 + SMa2355 0.66 +0.4 1,327,825 - SMa2355 0.71 +0.1 1,327,825 - SMa2355 0.71 +0.3 1,328,249 + -0.1 1,328,249 + +0.5 1,328,334 + -0.3 1,328,342 + -0.4 1,328,343 - -0.0 1,328,343 - +0.3 1,328,345 - +0.1 1,328,345 - -0.6 1,328,345 - +1.0 1,328,345 - +0.1 1,328,345 - -0.4 1,328,662 - +0.7 1,328,673 + -0.7 1,328,673 + +0.1 1,328,693 + -0.0 1,328,694 - +0.0 1,328,742 + -1.2 1,328,743 - +0.6 1,328,763 - -0.1 1,329,024 + -0.2 1,329,024 + +0.9 1,329,024 + +0.1 1,329,025 - -0.2 1,329,025 - +0.3 1,329,025 - -0.2 1,329,035 - +0.1 1,329,049 + +0.2 1,329,142 + -0.2 1,329,143 - -0.3 1,329,143 - -0.2 1,329,143 - -1.3 1,329,143 - +1.0
Or see this region's nucleotide sequence