Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0657 and SMa0659 are separated by 25 nucleotides SMa0659 and SMa0661 are separated by 366 nucleotides SMa0661 and SMa0662 are separated by 57 nucleotides SMa0662 and SMa0663 are separated by 114 nucleotides
SMa0657: SMa0657 - cytochrome c binding protein, amino terminus, at 349,400 to 349,597
SMa0657
SMa0659: SMa0659 - cytochrome c binding protein, carboxyl terminus, at 349,623 to 350,021
SMa0659
SMa0661: SMa0661 - hypothetical protein, at 350,388 to 350,867
SMa0661
SMa0662: SMa0662 - transcriptional regulator FixK, at 350,925 to 351,560
SMa0662
SMa0663: SMa0663 - hypothetical protein, at 351,675 to 351,944
SMa0663
Position (kb) 350
351 Strain fitness (log2 ratio) -2
-1
0
1
2 at 349.515 kb on + strand, within SMa0657 at 349.515 kb on + strand, within SMa0657 at 349.515 kb on + strand, within SMa0657 at 349.516 kb on - strand, within SMa0657 at 349.516 kb on - strand, within SMa0657 at 349.516 kb on - strand, within SMa0657 at 349.516 kb on - strand, within SMa0657 at 349.517 kb on + strand, within SMa0657 at 349.518 kb on - strand, within SMa0657 at 349.528 kb on + strand, within SMa0657 at 349.821 kb on - strand, within SMa0659 at 349.847 kb on - strand, within SMa0659 at 350.219 kb on + strand at 350.329 kb on - strand at 350.339 kb on + strand at 350.340 kb on - strand at 350.362 kb on + strand at 350.364 kb on + strand at 350.493 kb on + strand, within SMa0661 at 350.494 kb on - strand, within SMa0661 at 350.527 kb on + strand, within SMa0661 at 350.566 kb on + strand, within SMa0661 at 351.222 kb on + strand, within SMa0662 at 351.386 kb on + strand, within SMa0662 at 351.386 kb on + strand, within SMa0662 at 351.387 kb on - strand, within SMa0662 at 351.389 kb on - strand, within SMa0662 at 351.419 kb on - strand, within SMa0662 at 351.419 kb on - strand, within SMa0662 at 351.419 kb on - strand, within SMa0662 at 351.448 kb on + strand, within SMa0662 at 351.522 kb on + strand at 351.522 kb on + strand at 351.522 kb on + strand at 351.522 kb on + strand at 351.523 kb on - strand at 351.524 kb on + strand at 351.525 kb on - strand at 351.525 kb on - strand at 351.527 kb on - strand at 351.527 kb on - strand at 351.554 kb on + strand at 351.634 kb on - strand at 351.705 kb on + strand, within SMa0663 at 351.706 kb on - strand, within SMa0663 at 351.732 kb on + strand, within SMa0663 at 351.732 kb on + strand, within SMa0663
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 349,515 + SMa0657 0.58 +1.0 349,515 + SMa0657 0.58 +0.5 349,515 + SMa0657 0.58 +0.0 349,516 - SMa0657 0.59 -0.4 349,516 - SMa0657 0.59 -0.3 349,516 - SMa0657 0.59 +0.4 349,516 - SMa0657 0.59 +0.1 349,517 + SMa0657 0.59 +1.4 349,518 - SMa0657 0.60 +0.7 349,528 + SMa0657 0.65 -0.4 349,821 - SMa0659 0.50 +0.1 349,847 - SMa0659 0.56 +0.3 350,219 + +0.4 350,329 - -0.4 350,339 + -1.8 350,340 - -0.2 350,362 + +0.1 350,364 + -0.3 350,493 + SMa0661 0.22 +0.6 350,494 - SMa0661 0.22 +0.1 350,527 + SMa0661 0.29 -0.1 350,566 + SMa0661 0.37 +1.8 351,222 + SMa0662 0.47 -0.1 351,386 + SMa0662 0.72 -1.7 351,386 + SMa0662 0.72 +0.8 351,387 - SMa0662 0.73 -0.1 351,389 - SMa0662 0.73 +0.5 351,419 - SMa0662 0.78 -0.5 351,419 - SMa0662 0.78 -0.4 351,419 - SMa0662 0.78 +0.2 351,448 + SMa0662 0.82 +0.5 351,522 + -0.1 351,522 + -0.2 351,522 + +0.1 351,522 + -0.3 351,523 - +1.4 351,524 + -0.7 351,525 - +0.2 351,525 - +0.3 351,527 - +0.6 351,527 - -0.1 351,554 + +0.3 351,634 - +0.5 351,705 + SMa0663 0.11 -0.2 351,706 - SMa0663 0.11 +0.0 351,732 + SMa0663 0.21 +0.9 351,732 + SMa0663 0.21 +0.5
Or see this region's nucleotide sequence