Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0407 and SMa0412 are separated by 994 nucleotides SMa0412 and SMa0414 are separated by 629 nucleotides
SMa0407: SMa0407 - hypothetical protein, at 222,078 to 222,866
SMa0407
SMa0412: SMa0412 - hypothetical protein, at 223,861 to 224,175
SMa0412
SMa0414: SMa0414 - hypothetical protein, at 224,805 to 226,475
SMa0414
Position (kb) 223
224
225 Strain fitness (log2 ratio) -2
-1
0
1 at 222.931 kb on + strand at 223.027 kb on + strand at 223.027 kb on + strand at 223.028 kb on - strand at 223.028 kb on - strand at 223.028 kb on - strand at 223.042 kb on + strand at 223.149 kb on + strand at 223.150 kb on - strand at 223.150 kb on - strand at 223.150 kb on - strand at 223.255 kb on - strand at 223.325 kb on + strand at 223.325 kb on + strand at 223.325 kb on + strand at 223.326 kb on - strand at 223.326 kb on - strand at 223.326 kb on - strand at 223.326 kb on - strand at 223.326 kb on - strand at 223.329 kb on + strand at 223.389 kb on + strand at 223.390 kb on - strand at 223.393 kb on + strand at 223.414 kb on + strand at 223.421 kb on + strand at 223.467 kb on + strand at 223.468 kb on - strand at 223.468 kb on - strand at 223.468 kb on - strand at 223.517 kb on + strand at 223.554 kb on + strand at 223.554 kb on + strand at 223.647 kb on + strand at 223.725 kb on + strand at 223.781 kb on + strand at 223.810 kb on + strand at 223.811 kb on - strand at 223.862 kb on + strand at 223.910 kb on + strand, within SMa0412 at 223.910 kb on + strand, within SMa0412 at 223.910 kb on + strand, within SMa0412 at 223.985 kb on + strand, within SMa0412 at 224.058 kb on - strand, within SMa0412 at 224.117 kb on + strand, within SMa0412 at 224.156 kb on + strand at 224.156 kb on + strand at 224.157 kb on - strand at 224.157 kb on - strand at 224.224 kb on + strand at 224.224 kb on + strand at 224.224 kb on + strand at 224.225 kb on - strand at 224.288 kb on + strand at 224.289 kb on - strand at 224.289 kb on - strand at 224.399 kb on + strand at 224.440 kb on + strand at 224.440 kb on + strand at 224.441 kb on - strand at 224.441 kb on - strand at 224.441 kb on - strand at 224.441 kb on - strand at 224.476 kb on + strand at 224.527 kb on + strand at 224.538 kb on + strand at 224.539 kb on - strand at 224.539 kb on - strand at 224.539 kb on - strand at 224.582 kb on + strand at 224.588 kb on + strand at 224.588 kb on + strand at 224.656 kb on - strand at 224.716 kb on + strand at 224.941 kb on - strand at 225.011 kb on + strand, within SMa0414 at 225.011 kb on + strand, within SMa0414 at 225.057 kb on + strand, within SMa0414 at 225.093 kb on + strand, within SMa0414 at 225.115 kb on + strand, within SMa0414 at 225.115 kb on + strand, within SMa0414 at 225.116 kb on - strand, within SMa0414 at 225.130 kb on - strand, within SMa0414 at 225.146 kb on + strand, within SMa0414 at 225.147 kb on - strand, within SMa0414
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 222,931 + +0.1 223,027 + -0.5 223,027 + +0.3 223,028 - -0.8 223,028 - +0.1 223,028 - -0.5 223,042 + -0.4 223,149 + -0.1 223,150 - -0.2 223,150 - -0.2 223,150 - -0.0 223,255 - +0.2 223,325 + +0.2 223,325 + -0.2 223,325 + +0.3 223,326 - +0.1 223,326 - -0.1 223,326 - -0.2 223,326 - -0.3 223,326 - -0.2 223,329 + -0.3 223,389 + +0.3 223,390 - +1.0 223,393 + -0.3 223,414 + -0.9 223,421 + +0.3 223,467 + +1.1 223,468 - +0.6 223,468 - -0.1 223,468 - +0.7 223,517 + -1.3 223,554 + +0.6 223,554 + -0.3 223,647 + +0.3 223,725 + -0.1 223,781 + -0.1 223,810 + +0.1 223,811 - -0.4 223,862 + -0.2 223,910 + SMa0412 0.16 -0.5 223,910 + SMa0412 0.16 -0.5 223,910 + SMa0412 0.16 +0.2 223,985 + SMa0412 0.39 -0.1 224,058 - SMa0412 0.63 +0.6 224,117 + SMa0412 0.81 +1.3 224,156 + +0.2 224,156 + -0.0 224,157 - +0.2 224,157 - -0.0 224,224 + +0.0 224,224 + +0.3 224,224 + -0.2 224,225 - -0.2 224,288 + +0.2 224,289 - +0.1 224,289 - +0.4 224,399 + +1.6 224,440 + +0.2 224,440 + -0.6 224,441 - -0.2 224,441 - +0.0 224,441 - +0.6 224,441 - +0.6 224,476 + -0.8 224,527 + +1.5 224,538 + -0.5 224,539 - -2.5 224,539 - +0.4 224,539 - -0.8 224,582 + -0.1 224,588 + +0.2 224,588 + -0.0 224,656 - -1.3 224,716 + -1.3 224,941 - +0.0 225,011 + SMa0414 0.12 +0.2 225,011 + SMa0414 0.12 +0.2 225,057 + SMa0414 0.15 -0.6 225,093 + SMa0414 0.17 +0.1 225,115 + SMa0414 0.19 -0.1 225,115 + SMa0414 0.19 -0.3 225,116 - SMa0414 0.19 -1.0 225,130 - SMa0414 0.19 -0.3 225,146 + SMa0414 0.20 -0.8 225,147 - SMa0414 0.20 -0.2
Or see this region's nucleotide sequence