Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5383

Experiment: D-Gluconic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Gluconic Acid (C)
115,298	+		Pf1N1B4_5382	0.78	-0.4
115,299	-		Pf1N1B4_5382	0.78	+0.8
115,299	-		Pf1N1B4_5382	0.78	+0.6
115,406	+				-0.2
115,406	+				-1.2
115,415	+				-0.8
115,415	+				+0.3
115,415	+				-1.3
115,416	-				-1.0
115,434	+				-0.4
115,434	+				-1.6
115,434	+				-0.6
115,434	+				-0.4
115,434	+				-1.5
115,434	+				+0.2
115,434	+				-1.1
115,434	+				+0.4
115,434	+				-0.8
115,435	-				+1.1
115,478	+				+1.4
115,478	+				+0.1
115,479	-				+0.4
115,547	+				-0.7
115,547	+				-0.4
115,547	+				+1.4
115,548	-				+0.2
115,548	-				+2.6
115,645	+				-0.9
115,645	+				-1.8
115,645	+				+0.4
115,645	+				-1.4
115,645	+				+0.0
115,645	+				-0.1
115,645	+				-0.6
115,645	+				+0.5
115,645	+				-0.1
115,645	+				+0.6
115,645	+				+0.3
115,645	+				-1.8
115,645	+				+0.2
115,645	+				-0.9
115,646	-				-0.7
115,646	-				+1.0
115,646	-				+1.0
115,689	+				-0.2
115,689	+				-1.3
115,689	+				-1.0
115,689	+				-0.7
115,689	+				+0.3
115,689	+				-2.1
115,689	+				-0.1
115,689	+				-0.0
115,689	+				+1.1
115,690	-				-1.4
115,690	-				+0.7
115,690	-				+0.6
115,690	-				-1.0
115,723	+				-0.1
115,723	+				-0.6
115,723	+				-1.4
115,723	+				-0.8
115,723	+				-0.9
115,723	+				-1.3
115,723	+				-0.2
115,724	-				+0.2
115,736	+				-2.0
115,736	+				-1.4
115,882	-				+0.7
115,902	+				-0.0
115,902	+				-0.4
115,902	+				-2.2
115,948	+				-0.2
115,948	+				+0.2
115,952	+				-0.4
115,952	+				-0.9
115,952	+				+0.3
115,952	+				+0.2
115,952	+				-2.0
115,952	+				-0.7
115,952	+				+0.6
115,953	-				+0.0
115,976	+				-1.6
115,976	+				-0.2
115,976	+				-1.6
115,976	+				-0.6
115,989	+				+0.4
115,989	+				-0.2
116,000	+				-0.8
116,000	+				-0.8
116,000	+				-0.6
116,001	-				-0.1
116,036	+				-2.6
116,036	+				-0.1
116,036	+				-1.1
116,036	+				-0.8
116,037	-				-0.9
116,037	-				+0.4
116,093	+				-1.2
116,093	+				-0.2
116,093	+				-0.4
116,093	+				-0.4
116,093	+				-0.0
116,093	+				-1.0
116,094	-				+0.2
116,095	+				-1.9
116,095	+				+0.3
116,095	+				-1.9
116,095	+				-0.6
116,095	+				-1.2
116,095	+				-1.4
116,165	-				-0.9
116,188	+				+0.1
116,208	+				-0.4
116,421	+		Pf1N1B4_5383	0.54	+0.3
116,421	+		Pf1N1B4_5383	0.54	-1.5
116,421	+		Pf1N1B4_5383	0.54	-0.5
116,421	+		Pf1N1B4_5383	0.54	-0.4
116,421	+		Pf1N1B4_5383	0.54	-0.6
116,421	+		Pf1N1B4_5383	0.54	-1.4
116,421	+		Pf1N1B4_5383	0.54	-0.5
116,421	+		Pf1N1B4_5383	0.54	-0.4
116,421	+		Pf1N1B4_5383	0.54	-0.0
116,421	+		Pf1N1B4_5383	0.54	-1.8
116,421	+		Pf1N1B4_5383	0.54	-1.5
116,421	+		Pf1N1B4_5383	0.54	-0.4
116,421	+		Pf1N1B4_5383	0.54	-0.7
116,421	+		Pf1N1B4_5383	0.54	-1.3
116,421	+		Pf1N1B4_5383	0.54	-1.4
116,421	+		Pf1N1B4_5383	0.54	-0.5
116,421	+		Pf1N1B4_5383	0.54	-1.2
116,421	+		Pf1N1B4_5383	0.54	-1.0
116,421	+		Pf1N1B4_5383	0.54	-0.1
116,422	-		Pf1N1B4_5383	0.54	-0.3
116,422	-		Pf1N1B4_5383	0.54	-0.2
116,431	+		Pf1N1B4_5383	0.57	-2.1
116,431	+		Pf1N1B4_5383	0.57	-0.8
116,431	+		Pf1N1B4_5383	0.57	+1.2
116,431	+		Pf1N1B4_5383	0.57	-0.5
116,431	+		Pf1N1B4_5383	0.57	-2.1
116,431	+		Pf1N1B4_5383	0.57	-0.8
116,431	+		Pf1N1B4_5383	0.57	-1.2
116,431	+		Pf1N1B4_5383	0.57	-0.3
116,518	+		Pf1N1B4_5383	0.84	-0.5
116,519	-		Pf1N1B4_5383	0.84	-0.8
116,531	+		Pf1N1B4_5383	0.88	-0.1
116,531	+		Pf1N1B4_5383	0.88	-0.1
116,531	+		Pf1N1B4_5383	0.88	-0.6
116,531	+		Pf1N1B4_5383	0.88	-1.6
116,531	+		Pf1N1B4_5383	0.88	-0.0
116,531	+		Pf1N1B4_5383	0.88	-0.6
116,531	+		Pf1N1B4_5383	0.88	-1.7
116,531	+		Pf1N1B4_5383	0.88	-0.0
116,532	-		Pf1N1B4_5383	0.88	-0.8
116,572	+				-1.4
116,572	+				-2.2
116,572	+				+1.4
116,582	+				-0.5
116,582	+				-0.2
116,582	+				-1.5
116,582	+				-1.1
116,582	+				-2.2
116,583	-				+2.3
116,622	+				-1.3
116,622	+				+0.5
116,622	+				-0.2
116,623	-				-0.6
116,663	-				-0.8
116,672	-				-0.0
116,694	-				+0.6
116,722	+				+2.7
116,722	+				+1.2
116,723	-				-0.4
116,735	+				+0.1
116,752	+				-0.2
116,752	+				-0.1
116,752	+				+0.4
116,753	-				+0.4
116,790	+				+0.1
116,791	-				-0.4
116,791	-				-0.2
116,791	-				+2.0
116,796	+				+1.0
116,796	+				-1.1
116,796	+				-0.0
116,797	-				-0.4
116,797	-				+0.9
116,797	-				-0.0
116,802	+				+2.0
116,802	+				-0.4
116,802	+				-0.0
116,802	+				-0.0
116,802	+				+0.4
116,802	+				+0.3
116,802	+				+1.4
116,802	+				+0.2
116,803	-				-0.1
116,803	-				+0.6
116,803	-				+0.7
116,803	-				-0.0
116,805	+				+0.2
116,828	+				+0.2
116,849	+				-0.7
116,849	+				+0.1
116,849	+				+1.3
116,849	+				-0.7
116,850	-				-0.4
117,021	+		Pf1N1B4_5384	0.30	+0.5
117,022	-		Pf1N1B4_5384	0.30	+0.6
117,022	-		Pf1N1B4_5384	0.30	-1.2
117,051	+		Pf1N1B4_5384	0.47	-0.0
117,052	-		Pf1N1B4_5384	0.48	+0.2
117,052	-		Pf1N1B4_5384	0.48	+0.4
117,185	-				-1.3
117,241	+				+1.0
117,252	+				+0.2
117,291	+		Pf1N1B4_5385	0.16	-0.6
117,362	+		Pf1N1B4_5385	0.35	+0.6
117,362	+				+0.4
117,362	+		Pf1N1B4_5385	0.35	+0.4
117,362	+		Pf1N1B4_5385	0.35	+2.0
117,362	+		Pf1N1B4_5385	0.35	+1.6
117,362	+		Pf1N1B4_5385	0.35	-0.6
117,362	+		Pf1N1B4_5385	0.35	-0.4
117,453	+		Pf1N1B4_5385	0.59	-0.0
117,453	+		Pf1N1B4_5385	0.59	+0.2
117,454	-		Pf1N1B4_5385	0.59	+0.3
117,454	-		Pf1N1B4_5385	0.59	-0.0