Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2282

Experiment: D-Gluconic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Gluconic Acid (C)
2,596,310	+		Pf1N1B4_2280	0.81	-0.3
2,596,310	+		Pf1N1B4_2280	0.81	+0.6
2,596,471	+				+0.1
2,596,471	+				-1.8
2,596,546	-				+0.3
2,596,546	-				-0.4
2,596,573	-				-0.9
2,596,573	-				-1.4
2,596,665	-				+0.1
2,596,665	-				+0.1
2,596,665	-				-0.9
2,596,760	+		Pf1N1B4_2281	0.26	+0.2
2,596,761	-		Pf1N1B4_2281	0.26	+0.1
2,596,761	-		Pf1N1B4_2281	0.26	+0.2
2,596,761	-		Pf1N1B4_2281	0.26	+2.6
2,596,761	-		Pf1N1B4_2281	0.26	-0.5
2,596,900	-		Pf1N1B4_2281	0.54	-0.6
2,596,900	-		Pf1N1B4_2281	0.54	-0.4
2,596,982	+		Pf1N1B4_2281	0.71	+0.9
2,597,121	+				-0.9
2,597,121	+				+0.2
2,597,121	+				-0.9
2,597,121	+				-0.9
2,597,121	+				-0.4
2,597,121	+				-0.1
2,597,121	+				-0.7
2,597,121	+				-1.1
2,597,121	+				+0.1
2,597,121	+				-0.2
2,597,121	+				+0.3
2,597,121	+				-1.2
2,597,121	+				-1.3
2,597,121	+				+0.9
2,597,121	+				+1.1
2,597,121	+				+1.1
2,597,121	+				-0.9
2,597,121	+				-1.1
2,597,121	+				+1.3
2,597,121	+				-0.0
2,597,121	+				-0.7
2,597,121	+				-1.4
2,597,121	+				+0.1
2,597,121	+				-0.7
2,597,121	+				-0.7
2,597,121	+				+1.3
2,597,121	+				+1.1
2,597,122	-				+0.4
2,597,122	-				+3.1
2,597,122	-				+0.6
2,597,122	-				+0.1
2,597,122	-				+0.4
2,597,122	-				-1.7
2,597,122	-				-0.2
2,597,122	-				+0.2
2,597,122	-				-1.4
2,597,122	-				-0.4
2,597,122	-				+0.1
2,597,122	-				-2.3
2,597,122	-				+0.1
2,597,122	-				-0.4
2,597,122	-				-0.9
2,597,122	-				-0.4
2,597,122	-				+1.0
2,597,122	-				-1.5
2,597,122	-				-1.2
2,597,122	-				-0.1
2,597,122	-				-0.5
2,597,122	-				-0.9
2,597,122	-				+0.1
2,597,122	-				-0.2
2,597,122	-				-0.5
2,597,122	-				-1.4
2,597,125	+				+0.8
2,597,125	+				-0.1
2,597,126	-				-0.4
2,597,126	-				-0.5
2,597,126	-				+0.8
2,597,126	-				+0.4
2,597,126	-				+0.3
2,597,126	-				+0.9
2,597,126	-				-1.2
2,597,126	-				+0.6
2,597,305	+		Pf1N1B4_2282	0.19	-0.4
2,597,305	+		Pf1N1B4_2282	0.19	-1.7
2,597,305	+		Pf1N1B4_2282	0.19	-2.4
2,597,306	-		Pf1N1B4_2282	0.19	-0.7
2,597,306	-		Pf1N1B4_2282	0.19	-2.1
2,597,306	-		Pf1N1B4_2282	0.19	+0.3
2,597,306	-		Pf1N1B4_2282	0.19	+0.6
2,597,311	+		Pf1N1B4_2282	0.20	+0.1
2,597,311	+		Pf1N1B4_2282	0.20	-0.7
2,597,311	+		Pf1N1B4_2282	0.20	-2.4
2,597,311	+		Pf1N1B4_2282	0.20	-1.5
2,597,311	+		Pf1N1B4_2282	0.20	-3.0
2,597,311	+		Pf1N1B4_2282	0.20	-1.4
2,597,311	+		Pf1N1B4_2282	0.20	-2.2
2,597,311	+		Pf1N1B4_2282	0.20	-2.4
2,597,312	-		Pf1N1B4_2282	0.20	-2.5
2,597,312	-		Pf1N1B4_2282	0.20	-1.2
2,597,312	-		Pf1N1B4_2282	0.20	-1.5
2,597,312	-		Pf1N1B4_2282	0.20	-1.5
2,597,312	-		Pf1N1B4_2282	0.20	-0.5
2,597,312	-		Pf1N1B4_2282	0.20	-1.4
2,597,312	-		Pf1N1B4_2282	0.20	+0.2
2,597,312	-		Pf1N1B4_2282	0.20	-0.4
2,597,312	-		Pf1N1B4_2282	0.20	-1.5
2,597,596	+		Pf1N1B4_2282	0.64	-2.1
2,597,596	+		Pf1N1B4_2282	0.64	+0.3
2,597,596	+		Pf1N1B4_2282	0.64	-1.8
2,597,596	+		Pf1N1B4_2282	0.64	-0.2
2,597,596	+		Pf1N1B4_2282	0.64	-2.7
2,597,596	+		Pf1N1B4_2282	0.64	-1.9
2,597,597	-		Pf1N1B4_2282	0.64	-1.0
2,597,597	-		Pf1N1B4_2282	0.64	+0.6
2,597,665	+		Pf1N1B4_2282	0.74	-1.4
2,597,665	+		Pf1N1B4_2282	0.74	+0.8
2,597,695	+		Pf1N1B4_2282	0.79	-2.1
2,597,695	+		Pf1N1B4_2282	0.79	-0.9
2,597,695	+		Pf1N1B4_2282	0.79	-0.9
2,597,695	+		Pf1N1B4_2282	0.79	-0.9
2,597,696	-		Pf1N1B4_2282	0.79	-1.4
2,597,696	-		Pf1N1B4_2282	0.79	-1.7
2,597,704	+		Pf1N1B4_2282	0.80	-3.5
2,597,704	+		Pf1N1B4_2282	0.80	-2.1
2,597,704	+		Pf1N1B4_2282	0.80	+0.6
2,597,705	-		Pf1N1B4_2282	0.80	-0.9
2,597,728	+		Pf1N1B4_2282	0.84	-1.9
2,597,728	+		Pf1N1B4_2282	0.84	-0.4
2,597,728	+		Pf1N1B4_2282	0.84	-1.4
2,597,728	+		Pf1N1B4_2282	0.84	-2.7
2,597,728	+		Pf1N1B4_2282	0.84	-3.1
2,597,729	-		Pf1N1B4_2282	0.84	-0.9
2,597,764	+		Pf1N1B4_2282	0.89	-1.7
2,597,764	+		Pf1N1B4_2282	0.89	-2.9
2,597,764	+		Pf1N1B4_2282	0.89	-1.9
2,597,765	-		Pf1N1B4_2282	0.89	-2.4
2,597,765	-		Pf1N1B4_2282	0.89	-2.1
2,597,820	+				-2.1
2,597,835	+				-0.7
2,597,835	+				-1.7
2,597,835	+				+0.6
2,597,841	+				-2.2
2,597,842	-				-0.4
2,597,901	+				-1.7
2,597,901	+				-0.5
2,597,901	+				-0.8
2,597,901	+				-0.6
2,597,901	+				-0.1
2,597,901	+				+0.4
2,597,901	+				-1.1
2,597,901	+				+0.6
2,597,901	+				-0.7
2,597,901	+				-1.2
2,597,901	+				-0.1
2,597,901	+				-0.9
2,597,901	+				-0.8
2,597,901	+				+0.1
2,597,901	+				+1.1
2,597,901	+				-0.4
2,597,901	+				+1.1
2,597,901	+				-1.2
2,597,901	+				-0.3
2,597,901	+				-1.5
2,597,901	+				-0.1
2,597,901	+				-1.2
2,597,902	-				-0.7
2,597,902	-				+0.4
2,597,902	-				+1.6
2,597,902	-				-0.2
2,597,906	+				-1.5
2,597,906	+				-2.5
2,597,906	+				+0.9
2,597,906	+				-0.5
2,597,906	+				-0.1
2,597,906	+				-0.8
2,597,906	+				-1.8
2,597,906	+				+1.1
2,597,906	+				-0.3
2,597,906	+				-0.5
2,597,906	+				-0.7
2,597,906	+				-0.4
2,597,906	+				-0.5
2,597,906	+				-1.7
2,597,906	+				-1.0
2,597,906	+				-0.7
2,597,906	+				+1.2
2,597,906	+				-1.4
2,597,906	+				-0.0
2,597,906	+				+0.3
2,597,906	+				+2.0
2,597,906	+				-0.3
2,597,906	+				-0.9
2,597,906	+				+1.1
2,597,906	+				-1.4
2,597,906	+				-1.8
2,597,906	+				+0.2
2,597,906	+				-1.4
2,597,906	+				-2.2
2,597,907	-				-0.3
2,597,907	-				+0.4
2,597,907	-				+0.1
2,597,907	-				-0.9
2,597,907	-				+0.6
2,598,362	+		Pf1N1B4_2283	0.80	+0.6
2,598,362	+		Pf1N1B4_2283	0.80	-0.1
2,598,488	+				-0.1
2,598,515	+				+0.5
2,598,600	+				+1.6
2,598,771	+		Pf1N1B4_2284	0.13	+0.6