Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2280

Experiment: D-Gluconic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Gluconic Acid (C)
2,594,093	+				-0.2
2,594,093	+				+0.6
2,594,094	-				-0.6
2,594,109	-				+0.5
2,594,844	-				-0.7
2,594,845	+				+0.6
2,594,845	+				-0.2
2,594,845	+				+0.4
2,594,845	+				-0.4
2,594,845	+				-0.7
2,594,845	+				-1.3
2,594,846	-				-1.7
2,594,846	-				-1.5
2,594,846	-				+0.3
2,594,846	-				-0.4
2,594,846	-				-0.2
2,594,911	+				-0.1
2,594,911	+				-0.7
2,594,917	+				+0.6
2,594,918	-				-0.5
2,594,918	-				+0.4
2,594,959	+				+0.6
2,594,959	+		Pf1N1B4_2279	0.33	+0.1
2,594,959	+		Pf1N1B4_2279	0.33	+2.9
2,594,959	+		Pf1N1B4_2279	0.33	-1.8
2,594,960	-		Pf1N1B4_2279	0.34	-0.5
2,594,960	-		Pf1N1B4_2279	0.34	-0.4
2,594,960	-		Pf1N1B4_2279	0.34	-0.4
2,594,960	-		Pf1N1B4_2279	0.34	+0.6
2,594,960	-		Pf1N1B4_2279	0.34	-1.0
2,594,960	-		Pf1N1B4_2279	0.34	+0.9
2,594,960	-		Pf1N1B4_2279	0.34	+0.2
2,594,960	-		Pf1N1B4_2279	0.34	+0.8
2,594,963	+		Pf1N1B4_2279	0.36	-1.0
2,594,963	+		Pf1N1B4_2279	0.36	+0.6
2,594,963	+		Pf1N1B4_2279	0.36	+0.5
2,594,963	+		Pf1N1B4_2279	0.36	-1.0
2,594,963	+		Pf1N1B4_2279	0.36	-0.5
2,594,964	-		Pf1N1B4_2279	0.37	+0.6
2,594,964	-		Pf1N1B4_2279	0.37	-0.6
2,594,964	-		Pf1N1B4_2279	0.37	+0.6
2,594,964	-		Pf1N1B4_2279	0.37	+0.9
2,594,973	-		Pf1N1B4_2279	0.43	+0.3
2,594,973	-		Pf1N1B4_2279	0.43	-1.4
2,595,003	+		Pf1N1B4_2279	0.63	-0.4
2,595,004	-		Pf1N1B4_2279	0.64	+1.3
2,595,004	-		Pf1N1B4_2279	0.64	+0.0
2,595,090	+				-1.5
2,595,090	+				-2.0
2,595,090	+				-2.5
2,595,090	+				-1.2
2,595,090	+				-1.2
2,595,091	-				-0.4
2,595,091	-				-1.5
2,595,091	-				-0.9
2,595,091	-				-1.5
2,595,091	-				-1.7
2,595,091	-				-1.5
2,595,091	-				-0.7
2,595,121	-				+1.0
2,595,121	-				-0.7
2,595,121	-				-2.5
2,595,133	+				-1.3
2,595,186	-				-1.5
2,595,186	-				-1.8
2,595,243	+				-1.0
2,595,243	+		Pf1N1B4_2280	0.11	-1.6
2,595,244	-		Pf1N1B4_2280	0.11	-2.1
2,595,244	-		Pf1N1B4_2280	0.11	-1.7
2,595,245	+		Pf1N1B4_2280	0.11	-1.2
2,595,496	-		Pf1N1B4_2280	0.28	-0.7
2,595,501	+		Pf1N1B4_2280	0.28	-0.7
2,595,501	+		Pf1N1B4_2280	0.28	-0.2
2,595,502	-		Pf1N1B4_2280	0.28	-1.8
2,595,502	-		Pf1N1B4_2280	0.28	-1.7
2,595,502	-		Pf1N1B4_2280	0.28	+0.6
2,595,502	-		Pf1N1B4_2280	0.28	-0.8
2,595,513	+		Pf1N1B4_2280	0.29	-1.0
2,595,513	+		Pf1N1B4_2280	0.29	-3.0
2,595,651	+		Pf1N1B4_2280	0.38	-1.8
2,595,651	+		Pf1N1B4_2280	0.38	-0.8
2,595,651	+		Pf1N1B4_2280	0.38	-1.0
2,595,651	+		Pf1N1B4_2280	0.38	-1.7
2,595,652	-		Pf1N1B4_2280	0.38	-0.7
2,595,652	-		Pf1N1B4_2280	0.38	-1.7
2,595,819	+		Pf1N1B4_2280	0.49	+0.6
2,595,819	+		Pf1N1B4_2280	0.49	-0.2
2,595,819	+		Pf1N1B4_2280	0.49	-2.4
2,595,820	-		Pf1N1B4_2280	0.49	-2.9
2,595,820	-		Pf1N1B4_2280	0.49	-1.4
2,595,824	-		Pf1N1B4_2280	0.49	+0.0
2,595,876	-		Pf1N1B4_2280	0.53	-2.3
2,595,879	+		Pf1N1B4_2280	0.53	-0.9
2,595,880	-		Pf1N1B4_2280	0.53	-0.7
2,595,942	+		Pf1N1B4_2280	0.57	-0.4
2,595,942	+		Pf1N1B4_2280	0.57	-0.7
2,595,942	+		Pf1N1B4_2280	0.57	+0.6
2,595,942	+		Pf1N1B4_2280	0.57	+0.6
2,595,942	+		Pf1N1B4_2280	0.57	-0.7
2,595,942	+		Pf1N1B4_2280	0.57	-2.1
2,595,942	+		Pf1N1B4_2280	0.57	+0.0
2,595,942	+		Pf1N1B4_2280	0.57	-2.1
2,595,942	+		Pf1N1B4_2280	0.57	+0.2
2,595,942	+		Pf1N1B4_2280	0.57	-1.0
2,595,943	-		Pf1N1B4_2280	0.57	-1.0
2,595,943	-		Pf1N1B4_2280	0.57	+0.6
2,595,943	-		Pf1N1B4_2280	0.57	-1.5
2,595,943	-				-0.4
2,595,943	-		Pf1N1B4_2280	0.57	-0.4
2,596,152	+		Pf1N1B4_2280	0.71	-1.0
2,596,152	+		Pf1N1B4_2280	0.71	-1.0
2,596,159	-		Pf1N1B4_2280	0.71	-1.4
2,596,310	+		Pf1N1B4_2280	0.81	-0.3
2,596,310	+		Pf1N1B4_2280	0.81	+0.6
2,596,471	+				+0.1
2,596,471	+				-1.8
2,596,546	-				+0.3
2,596,546	-				-0.4
2,596,573	-				-0.9
2,596,573	-				-1.4
2,596,665	-				+0.1
2,596,665	-				+0.1
2,596,665	-				-0.9
2,596,760	+		Pf1N1B4_2281	0.26	+0.2
2,596,761	-		Pf1N1B4_2281	0.26	+0.1
2,596,761	-		Pf1N1B4_2281	0.26	+0.2
2,596,761	-		Pf1N1B4_2281	0.26	+2.6
2,596,761	-		Pf1N1B4_2281	0.26	-0.5
2,596,900	-		Pf1N1B4_2281	0.54	-0.6
2,596,900	-		Pf1N1B4_2281	0.54	-0.4
2,596,982	+		Pf1N1B4_2281	0.71	+0.9
2,597,121	+				-0.9
2,597,121	+				+0.2
2,597,121	+				-0.9
2,597,121	+				-0.9
2,597,121	+				-0.4
2,597,121	+				-0.1
2,597,121	+				-0.7
2,597,121	+				-1.1
2,597,121	+				+0.1
2,597,121	+				-0.2
2,597,121	+				+0.3
2,597,121	+				-1.2
2,597,121	+				-1.3
2,597,121	+				+0.9
2,597,121	+				+1.1
2,597,121	+				+1.1
2,597,121	+				-0.9
2,597,121	+				-1.1
2,597,121	+				+1.3
2,597,121	+				-0.0
2,597,121	+				-0.7
2,597,121	+				-1.4
2,597,121	+				+0.1
2,597,121	+				-0.7
2,597,121	+				-0.7
2,597,121	+				+1.3
2,597,121	+				+1.1
2,597,122	-				+0.4
2,597,122	-				+3.1
2,597,122	-				+0.6
2,597,122	-				+0.1
2,597,122	-				+0.4
2,597,122	-				-1.7
2,597,122	-				-0.2
2,597,122	-				+0.2
2,597,122	-				-1.4
2,597,122	-				-0.4
2,597,122	-				+0.1
2,597,122	-				-2.3
2,597,122	-				+0.1
2,597,122	-				-0.4
2,597,122	-				-0.9
2,597,122	-				-0.4
2,597,122	-				+1.0
2,597,122	-				-1.5
2,597,122	-				-1.2
2,597,122	-				-0.1
2,597,122	-				-0.5
2,597,122	-				-0.9
2,597,122	-				+0.1
2,597,122	-				-0.2
2,597,122	-				-0.5
2,597,122	-				-1.4
2,597,125	+				+0.8
2,597,125	+				-0.1
2,597,126	-				-0.4
2,597,126	-				-0.5
2,597,126	-				+0.8
2,597,126	-				+0.4
2,597,126	-				+0.3
2,597,126	-				+0.9
2,597,126	-				-1.2
2,597,126	-				+0.6
2,597,305	+		Pf1N1B4_2282	0.19	-0.4
2,597,305	+		Pf1N1B4_2282	0.19	-1.7
2,597,305	+		Pf1N1B4_2282	0.19	-2.4
2,597,306	-		Pf1N1B4_2282	0.19	-0.7
2,597,306	-		Pf1N1B4_2282	0.19	-2.1
2,597,306	-		Pf1N1B4_2282	0.19	+0.3
2,597,306	-		Pf1N1B4_2282	0.19	+0.6
2,597,311	+		Pf1N1B4_2282	0.20	+0.1
2,597,311	+		Pf1N1B4_2282	0.20	-0.7
2,597,311	+		Pf1N1B4_2282	0.20	-2.4
2,597,311	+		Pf1N1B4_2282	0.20	-1.5
2,597,311	+		Pf1N1B4_2282	0.20	-3.0
2,597,311	+		Pf1N1B4_2282	0.20	-1.4
2,597,311	+		Pf1N1B4_2282	0.20	-2.2
2,597,311	+		Pf1N1B4_2282	0.20	-2.4
2,597,312	-		Pf1N1B4_2282	0.20	-2.5
2,597,312	-		Pf1N1B4_2282	0.20	-1.2
2,597,312	-		Pf1N1B4_2282	0.20	-1.5
2,597,312	-		Pf1N1B4_2282	0.20	-1.5
2,597,312	-		Pf1N1B4_2282	0.20	-0.5
2,597,312	-		Pf1N1B4_2282	0.20	-1.4
2,597,312	-		Pf1N1B4_2282	0.20	+0.2
2,597,312	-		Pf1N1B4_2282	0.20	-0.4
2,597,312	-		Pf1N1B4_2282	0.20	-1.5