Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1568

Experiment: D-Gluconic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Gluconic Acid (C)
1,803,818	+		Pf1N1B4_1565	0.37	-1.7
1,803,818	+		Pf1N1B4_1565	0.37	-2.3
1,803,818	+		Pf1N1B4_1565	0.37	-1.6
1,803,818	+		Pf1N1B4_1565	0.37	-2.0
1,803,819	-		Pf1N1B4_1565	0.37	+0.0
1,803,819	-		Pf1N1B4_1565	0.37	-1.4
1,803,819	-		Pf1N1B4_1565	0.37	-2.4
1,803,819	-		Pf1N1B4_1565	0.37	-0.6
1,803,819	-		Pf1N1B4_1565	0.37	-1.4
1,803,819	-		Pf1N1B4_1565	0.37	-1.2
1,803,980	+		Pf1N1B4_1565	0.77	-2.5
1,803,981	-		Pf1N1B4_1565	0.77	-1.2
1,803,981	-		Pf1N1B4_1565	0.77	-0.4
1,804,028	-				+1.6
1,804,028	-		Pf1N1B4_1565	0.89	-1.2
1,804,043	-				-0.2
1,804,043	-				-1.2
1,804,043	-				-1.4
1,804,043	-				-1.8
1,804,043	-				-0.7
1,804,046	+				-0.3
1,804,046	+				-0.2
1,804,046	+				-1.3
1,804,047	-				-0.4
1,804,047	-				-1.9
1,804,047	-				-0.2
1,804,047	-				-1.2
1,804,047	-				-3.2
1,804,047	-				-0.1
1,804,060	+				-0.6
1,804,060	+				-1.2
1,804,060	+				-2.1
1,804,060	+				-0.7
1,804,061	-				-3.2
1,804,061	-				-2.1
1,804,061	-				-0.6
1,804,061	-				-2.4
1,804,061	-				+0.0
1,804,061	-				-1.0
1,804,061	-				+2.2
1,804,061	-				+0.0
1,804,061	-				+0.0
1,804,061	-				-1.4
1,804,061	-				-0.4
1,804,061	-				-2.6
1,804,061	-				-1.8
1,804,061	-				-1.0
1,804,061	-				-2.4
1,804,061	-				-1.9
1,804,061	-				-0.4
1,804,061	-				-1.6
1,804,133	+		Pf1N1B4_1566	0.20	+1.6
1,804,134	+		Pf1N1B4_1566	0.21	-1.0
1,804,134	+		Pf1N1B4_1566	0.21	-1.7
1,804,134	+				+1.6
1,804,134	+		Pf1N1B4_1566	0.21	-1.1
1,804,134	+		Pf1N1B4_1566	0.21	-0.4
1,804,134	+		Pf1N1B4_1566	0.21	-0.4
1,804,134	+		Pf1N1B4_1566	0.21	-1.7
1,804,135	-		Pf1N1B4_1566	0.21	-0.6
1,804,135	-		Pf1N1B4_1566	0.21	+0.5
1,804,135	-		Pf1N1B4_1566	0.21	-0.7
1,804,135	-		Pf1N1B4_1566	0.21	-1.0
1,804,135	-		Pf1N1B4_1566	0.21	-1.7
1,804,135	-		Pf1N1B4_1566	0.21	-1.6
1,804,135	-		Pf1N1B4_1566	0.21	-1.0
1,804,135	-		Pf1N1B4_1566	0.21	-2.3
1,804,135	-		Pf1N1B4_1566	0.21	-2.4
1,804,135	-		Pf1N1B4_1566	0.21	-1.4
1,804,135	-		Pf1N1B4_1566	0.21	-0.6
1,804,135	-		Pf1N1B4_1566	0.21	-0.1
1,804,135	-		Pf1N1B4_1566	0.21	-1.8
1,804,135	-		Pf1N1B4_1566	0.21	-0.5
1,804,135	-		Pf1N1B4_1566	0.21	+0.4
1,804,135	-		Pf1N1B4_1566	0.21	+1.6
1,804,135	-		Pf1N1B4_1566	0.21	-0.2
1,804,135	-		Pf1N1B4_1566	0.21	-0.7
1,804,135	-		Pf1N1B4_1566	0.21	-2.1
1,804,135	-		Pf1N1B4_1566	0.21	-1.4
1,804,135	-		Pf1N1B4_1566	0.21	-0.7
1,804,135	-		Pf1N1B4_1566	0.21	-2.3
1,804,135	-		Pf1N1B4_1566	0.21	-0.4
1,804,135	-		Pf1N1B4_1566	0.21	-3.1
1,804,149	+		Pf1N1B4_1566	0.25	-1.8
1,804,150	-		Pf1N1B4_1566	0.26	-0.4
1,804,150	-		Pf1N1B4_1566	0.26	+0.6
1,804,258	-		Pf1N1B4_1566	0.58	-1.0
1,804,258	-		Pf1N1B4_1566	0.58	-2.6
1,804,258	-		Pf1N1B4_1566	0.58	-1.6
1,804,403	+				+0.4
1,804,403	+				-0.7
1,804,403	+				+3.2
1,804,403	+				-0.0
1,804,404	-				+1.6
1,804,404	-				+0.0
1,804,404	-				+0.4
1,804,404	-				+0.6
1,804,404	-				-1.1
1,804,404	-				+0.0
1,804,404	-				+0.5
1,804,404	-				+2.2
1,804,404	-				-0.6
1,804,404	-				-0.6
1,804,404	-				-1.0
1,804,404	-				+0.1
1,804,404	-				+0.6
1,804,404	-				+0.3
1,804,404	-				+0.3
1,804,404	-				-0.8
1,804,404	-				-0.3
1,804,404	-				+0.2
1,804,404	-				+0.0
1,804,541	+		Pf1N1B4_1567	0.43	-0.6
1,804,541	+		Pf1N1B4_1567	0.43	-1.5
1,804,541	+		Pf1N1B4_1567	0.43	+0.0
1,804,542	-		Pf1N1B4_1567	0.43	+0.0
1,804,709	+				+0.5
1,804,709	+				-0.8
1,804,709	+				-0.4
1,804,709	+				-0.0
1,804,709	+				-2.0
1,804,709	+				+3.9
1,804,709	+				-0.9
1,804,709	+				-0.5
1,804,709	+				+0.0
1,804,709	+				+0.4
1,804,710	-				-0.6
1,804,710	-				-1.6
1,804,710	-				+0.4
1,804,710	-				-1.7
1,804,710	-				+0.6
1,804,710	-				-0.1
1,804,710	-				-0.4
1,804,710	-				+0.2
1,804,710	-				-0.1
1,804,710	-				-0.5
1,804,719	+				-0.2
1,804,719	+				-0.3
1,804,719	+				-0.1
1,804,720	-				+1.9
1,804,720	-				+0.0
1,804,986	-		Pf1N1B4_1568	0.65	-2.1
1,805,060	+		Pf1N1B4_1568	0.82	+0.4
1,805,061	-		Pf1N1B4_1568	0.82	-1.2
1,805,061	-		Pf1N1B4_1568	0.82	-1.2
1,805,061	-		Pf1N1B4_1568	0.82	-1.6
1,805,061	-		Pf1N1B4_1568	0.82	-1.4
1,805,061	-		Pf1N1B4_1568	0.82	+0.0
1,805,061	-		Pf1N1B4_1568	0.82	+0.0
1,805,061	-		Pf1N1B4_1568	0.82	+1.0
1,805,268	+		Pf1N1B4_1569	0.17	-1.1
1,805,268	+		Pf1N1B4_1569	0.17	-0.4
1,805,268	+				+0.0
1,805,268	+		Pf1N1B4_1569	0.17	+0.0
1,805,268	+		Pf1N1B4_1569	0.17	+0.2
1,805,268	+		Pf1N1B4_1569	0.17	-0.1
1,805,268	+		Pf1N1B4_1569	0.17	-0.4
1,805,268	+		Pf1N1B4_1569	0.17	+0.6
1,805,268	+		Pf1N1B4_1569	0.17	-0.8
1,805,268	+		Pf1N1B4_1569	0.17	+0.0
1,805,268	+		Pf1N1B4_1569	0.17	-0.2
1,805,268	+		Pf1N1B4_1569	0.17	-0.8
1,805,268	+		Pf1N1B4_1569	0.17	+0.4
1,805,268	+		Pf1N1B4_1569	0.17	+0.5
1,805,268	+		Pf1N1B4_1569	0.17	+1.1
1,805,268	+		Pf1N1B4_1569	0.17	-0.2
1,805,268	+		Pf1N1B4_1569	0.17	+0.4
1,805,268	+		Pf1N1B4_1569	0.17	-0.3
1,805,268	+		Pf1N1B4_1569	0.17	-0.6
1,805,268	+		Pf1N1B4_1569	0.17	-0.2
1,805,268	+		Pf1N1B4_1569	0.17	+0.2
1,805,269	-		Pf1N1B4_1569	0.17	-0.6
1,805,269	-		Pf1N1B4_1569	0.17	-1.1
1,805,269	-		Pf1N1B4_1569	0.17	-1.6
1,805,269	-		Pf1N1B4_1569	0.17	-0.7
1,805,269	-		Pf1N1B4_1569	0.17	-0.4
1,805,269	-		Pf1N1B4_1569	0.17	+0.3
1,805,269	-		Pf1N1B4_1569	0.17	+1.6
1,805,269	-		Pf1N1B4_1569	0.17	-0.4
1,805,269	-				+0.6
1,805,269	-				+1.6
1,805,269	-		Pf1N1B4_1569	0.17	-0.7
1,805,269	-		Pf1N1B4_1569	0.17	+0.9
1,805,269	-		Pf1N1B4_1569	0.17	+0.3
1,805,298	+		Pf1N1B4_1569	0.21	+0.6
1,805,298	+		Pf1N1B4_1569	0.21	-1.8
1,805,299	-		Pf1N1B4_1569	0.21	+1.0
1,805,299	-		Pf1N1B4_1569	0.21	+0.0
1,805,299	-		Pf1N1B4_1569	0.21	+0.4
1,805,299	-		Pf1N1B4_1569	0.21	-1.2
1,805,299	-		Pf1N1B4_1569	0.21	+0.3
1,805,442	+		Pf1N1B4_1569	0.39	-0.6
1,805,442	+		Pf1N1B4_1569	0.39	+0.0
1,805,442	+		Pf1N1B4_1569	0.39	-2.1
1,805,442	+		Pf1N1B4_1569	0.39	-0.5
1,805,442	+		Pf1N1B4_1569	0.39	+1.2
1,805,442	+		Pf1N1B4_1569	0.39	-1.4
1,805,442	+		Pf1N1B4_1569	0.39	+0.6
1,805,442	+		Pf1N1B4_1569	0.39	-0.4
1,805,442	+		Pf1N1B4_1569	0.39	+0.0
1,805,442	+		Pf1N1B4_1569	0.39	+0.0
1,805,442	+		Pf1N1B4_1569	0.39	+0.7
1,805,442	+		Pf1N1B4_1569	0.39	+0.9
1,805,443	-		Pf1N1B4_1569	0.39	-3.6
1,805,443	-		Pf1N1B4_1569	0.39	+0.6
1,805,443	-		Pf1N1B4_1569	0.39	-0.4
1,805,443	-		Pf1N1B4_1569	0.39	+1.9
1,805,443	-		Pf1N1B4_1569	0.39	+1.0
1,805,443	-		Pf1N1B4_1569	0.39	+1.2
1,805,443	-		Pf1N1B4_1569	0.39	-0.0
1,805,443	-		Pf1N1B4_1569	0.39	+0.0
1,805,499	+		Pf1N1B4_1569	0.46	-0.7
1,805,499	+		Pf1N1B4_1569	0.46	-1.3
1,805,499	+		Pf1N1B4_1569	0.46	-1.1
1,805,499	+		Pf1N1B4_1569	0.46	+0.2
1,805,499	+		Pf1N1B4_1569	0.46	-1.3
1,805,499	+		Pf1N1B4_1569	0.46	-1.6
1,805,500	-				+1.6
1,805,500	-		Pf1N1B4_1569	0.46	-0.3
1,805,500	-		Pf1N1B4_1569	0.46	+0.0
1,805,500	-		Pf1N1B4_1569	0.46	+0.0
1,805,500	-		Pf1N1B4_1569	0.46	+0.0
1,805,500	-		Pf1N1B4_1569	0.46	+0.2
1,805,500	-		Pf1N1B4_1569	0.46	+0.9
1,805,500	-		Pf1N1B4_1569	0.46	+0.4
1,805,520	+		Pf1N1B4_1569	0.49	-0.0
1,805,520	+		Pf1N1B4_1569	0.49	+0.2
1,805,520	+		Pf1N1B4_1569	0.49	-1.2
1,805,520	+		Pf1N1B4_1569	0.49	-0.4
1,805,521	-		Pf1N1B4_1569	0.49	+0.3
1,805,604	+		Pf1N1B4_1569	0.59	-1.4
1,805,604	+		Pf1N1B4_1569	0.59	-0.5
1,805,604	+		Pf1N1B4_1569	0.59	-1.6
1,805,604	+		Pf1N1B4_1569	0.59	-2.0
1,805,604	+		Pf1N1B4_1569	0.59	-0.8
1,805,604	+		Pf1N1B4_1569	0.59	+1.3
1,805,604	+		Pf1N1B4_1569	0.59	+0.4
1,805,605	-		Pf1N1B4_1569	0.59	-0.1
1,805,605	-		Pf1N1B4_1569	0.59	-0.7
1,805,605	-		Pf1N1B4_1569	0.59	+0.9
1,805,605	-		Pf1N1B4_1569	0.59	-0.2
1,805,605	-		Pf1N1B4_1569	0.59	-0.8
1,805,605	-		Pf1N1B4_1569	0.59	+0.6
1,805,605	-		Pf1N1B4_1569	0.59	+1.0
1,805,605	-		Pf1N1B4_1569	0.59	+1.6
1,805,605	-		Pf1N1B4_1569	0.59	-1.4
1,805,706	+		Pf1N1B4_1569	0.72	-0.1
1,805,706	+		Pf1N1B4_1569	0.72	-2.2
1,805,706	+		Pf1N1B4_1569	0.72	-1.0
1,805,706	+		Pf1N1B4_1569	0.72	-0.3
1,805,706	+		Pf1N1B4_1569	0.72	-0.5
1,805,706	+		Pf1N1B4_1569	0.72	-0.4
1,805,707	-		Pf1N1B4_1569	0.72	+0.5
1,805,727	+		Pf1N1B4_1569	0.75	-0.4
1,805,727	+		Pf1N1B4_1569	0.75	+0.2
1,805,727	+		Pf1N1B4_1569	0.75	+0.9
1,805,727	+		Pf1N1B4_1569	0.75	-1.3
1,805,727	+		Pf1N1B4_1569	0.75	-0.5
1,805,728	-		Pf1N1B4_1569	0.75	-1.2
1,805,728	-		Pf1N1B4_1569	0.75	-2.7
1,805,728	-		Pf1N1B4_1569	0.75	-0.4
1,805,728	-		Pf1N1B4_1569	0.75	-1.1
1,805,728	-		Pf1N1B4_1569	0.75	+0.6
1,805,728	-		Pf1N1B4_1569	0.75	+0.6
1,806,081	+		Pf1N1B4_1570	0.22	-0.0
1,806,081	+		Pf1N1B4_1570	0.22	-1.2
1,806,082	-		Pf1N1B4_1570	0.22	-0.2
1,806,082	-				+0.6