Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01900 and HSERO_RS01905 are separated by 103 nucleotides HSERO_RS01905 and HSERO_RS01910 are separated by 83 nucleotides HSERO_RS01910 and HSERO_RS01915 are separated by 100 nucleotides
HSERO_RS01900: HSERO_RS01900 - hypothetical protein, at 418,751 to 419,290
_RS01900
HSERO_RS01905: HSERO_RS01905 - peroxiredoxin, at 419,394 to 419,939
_RS01905
HSERO_RS01910: HSERO_RS01910 - sugar kinase, at 420,023 to 420,958
_RS01910
HSERO_RS01915: HSERO_RS01915 - membrane protein, at 421,059 to 422,348
_RS01915
Position (kb) 420
421 Strain fitness (log2 ratio) -1
0
1
2
3 at 419.628 kb on + strand, within HSERO_RS01905 at 419.799 kb on + strand, within HSERO_RS01905 at 419.895 kb on - strand at 419.900 kb on - strand at 419.910 kb on - strand at 419.915 kb on - strand at 419.991 kb on + strand at 421.019 kb on + strand at 421.036 kb on - strand at 421.051 kb on + strand at 421.094 kb on - strand at 421.243 kb on + strand, within HSERO_RS01915 at 421.411 kb on + strand, within HSERO_RS01915 at 421.555 kb on - strand, within HSERO_RS01915 at 421.627 kb on - strand, within HSERO_RS01915 at 421.807 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 419,628 + HSERO_RS01905 0.43 +0.5 419,799 + HSERO_RS01905 0.74 +0.0 419,895 - -0.7 419,900 - +0.3 419,910 - +0.3 419,915 - -0.8 419,991 + +0.6 421,019 + +0.3 421,036 - -0.4 421,051 + +0.4 421,094 - +1.1 421,243 + HSERO_RS01915 0.14 +1.1 421,411 + HSERO_RS01915 0.27 +0.6 421,555 - HSERO_RS01915 0.38 +0.9 421,627 - HSERO_RS01915 0.44 +1.2 421,807 - +3.3
Or see this region's nucleotide sequence