Experiment: Choline chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3508 and Ga0059261_3509 are separated by 1 nucleotides Ga0059261_3509 and Ga0059261_3510 are separated by 228 nucleotides Ga0059261_3510 and Ga0059261_3511 overlap by 4 nucleotides
Ga0059261_3508: Ga0059261_3508 - 7-keto-8-aminopelargonate synthetase and related enzymes, at 3,631,619 to 3,632,872
_3508
Ga0059261_3509: Ga0059261_3509 - Acyl carrier protein, at 3,632,874 to 3,633,119
_3509
Ga0059261_3510: Ga0059261_3510 - Sortase and related acyltransferases, at 3,633,348 to 3,633,845
_3510
Ga0059261_3511: Ga0059261_3511 - Nucleoside-diphosphate-sugar epimerases, at 3,633,842 to 3,634,747
_3511
Position (kb)
3632
3633
3634 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3633.131 kb on - strand at 3633.285 kb on + strand at 3633.606 kb on - strand, within Ga0059261_3510 at 3633.668 kb on + strand, within Ga0059261_3510 at 3633.668 kb on + strand, within Ga0059261_3510 at 3633.669 kb on - strand, within Ga0059261_3510 at 3633.669 kb on - strand at 3633.721 kb on + strand, within Ga0059261_3510 at 3633.722 kb on - strand, within Ga0059261_3510 at 3633.748 kb on + strand, within Ga0059261_3510 at 3633.748 kb on + strand, within Ga0059261_3510 at 3633.748 kb on + strand, within Ga0059261_3510 at 3633.748 kb on + strand, within Ga0059261_3510 at 3633.748 kb on + strand, within Ga0059261_3510 at 3633.749 kb on - strand, within Ga0059261_3510 at 3633.749 kb on - strand, within Ga0059261_3510 at 3633.754 kb on + strand, within Ga0059261_3510 at 3633.754 kb on + strand, within Ga0059261_3510 at 3633.754 kb on + strand, within Ga0059261_3510 at 3633.754 kb on + strand, within Ga0059261_3510 at 3633.754 kb on + strand, within Ga0059261_3510 at 3633.754 kb on + strand, within Ga0059261_3510 at 3633.755 kb on - strand, within Ga0059261_3510 at 3633.755 kb on - strand, within Ga0059261_3510 at 3633.755 kb on - strand, within Ga0059261_3510 at 3633.755 kb on - strand, within Ga0059261_3510 at 3633.755 kb on - strand at 3633.755 kb on - strand, within Ga0059261_3510 at 3633.755 kb on - strand, within Ga0059261_3510 at 3633.755 kb on - strand, within Ga0059261_3510 at 3633.755 kb on - strand, within Ga0059261_3510 at 3633.755 kb on - strand, within Ga0059261_3510 at 3633.755 kb on - strand, within Ga0059261_3510 at 3633.755 kb on - strand, within Ga0059261_3510 at 3633.755 kb on - strand, within Ga0059261_3510
Per-strain Table
Position Strand Gene LocusTag Fraction Choline chloride 10 mM remove 3,633,131 - -1.0 3,633,285 + -0.2 3,633,606 - Ga0059261_3510 0.52 -0.4 3,633,668 + Ga0059261_3510 0.64 -1.8 3,633,668 + Ga0059261_3510 0.64 -0.5 3,633,669 - Ga0059261_3510 0.64 +0.2 3,633,669 - +0.8 3,633,721 + Ga0059261_3510 0.75 +0.3 3,633,722 - Ga0059261_3510 0.75 -0.8 3,633,748 + Ga0059261_3510 0.80 +0.3 3,633,748 + Ga0059261_3510 0.80 +2.0 3,633,748 + Ga0059261_3510 0.80 +0.8 3,633,748 + Ga0059261_3510 0.80 +0.3 3,633,748 + Ga0059261_3510 0.80 +0.1 3,633,749 - Ga0059261_3510 0.81 +0.8 3,633,749 - Ga0059261_3510 0.81 -0.7 3,633,754 + Ga0059261_3510 0.82 +0.1 3,633,754 + Ga0059261_3510 0.82 -0.2 3,633,754 + Ga0059261_3510 0.82 +0.2 3,633,754 + Ga0059261_3510 0.82 +0.6 3,633,754 + Ga0059261_3510 0.82 -0.2 3,633,754 + Ga0059261_3510 0.82 -0.9 3,633,755 - Ga0059261_3510 0.82 -0.8 3,633,755 - Ga0059261_3510 0.82 -0.1 3,633,755 - Ga0059261_3510 0.82 +0.3 3,633,755 - Ga0059261_3510 0.82 +0.0 3,633,755 - -0.8 3,633,755 - Ga0059261_3510 0.82 -0.4 3,633,755 - Ga0059261_3510 0.82 -0.2 3,633,755 - Ga0059261_3510 0.82 -0.3 3,633,755 - Ga0059261_3510 0.82 -0.5 3,633,755 - Ga0059261_3510 0.82 +0.2 3,633,755 - Ga0059261_3510 0.82 +0.2 3,633,755 - Ga0059261_3510 0.82 +0.0 3,633,755 - Ga0059261_3510 0.82 -0.5
Or see this region's nucleotide sequence