Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2430

Experiment: Choline chloride 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM
2,520,275	+		Ga0059261_2428	0.87	+0.9
2,520,275	+		Ga0059261_2428	0.87	-0.2
2,520,276	-				-0.5
2,520,276	-		Ga0059261_2428	0.87	+0.2
2,520,289	+		Ga0059261_2428	0.89	-0.5
2,520,290	-		Ga0059261_2428	0.89	+1.0
2,520,290	-		Ga0059261_2428	0.89	+0.4
2,520,290	-		Ga0059261_2428	0.89	-1.5
2,520,333	+				-0.5
2,520,333	+				+0.2
2,520,361	+				-0.5
2,520,362	-				+0.1
2,520,362	-				-0.2
2,520,418	+				+0.9
2,520,457	+				+0.9
2,520,457	+				-2.7
2,520,458	-				-0.6
2,520,463	+				+0.4
2,520,464	-				-1.0
2,520,474	+				-0.2
2,520,475	-				-0.3
2,520,475	-				-0.0
2,520,475	-				-0.4
2,520,476	+				-0.3
2,520,477	-				+0.1
2,520,477	-				-0.1
2,520,491	+				+0.3
2,520,491	+				-0.5
2,520,572	-				-1.1
2,520,572	-				+0.4
2,520,572	-				+0.9
2,520,572	-				-0.3
2,520,573	+				+0.6
2,520,573	+				-0.1
2,520,573	+				+0.7
2,520,574	-				-0.2
2,520,577	+				-0.2
2,520,642	+				+0.3
2,520,642	+				+0.7
2,520,642	+				-0.1
2,520,642	+				+0.0
2,520,642	+				+0.2
2,520,643	-				-0.2
2,520,643	-				-0.2
2,520,643	-				+0.1
2,520,643	-				-0.3
2,520,643	-				+0.1
2,520,643	-				-1.5
2,520,647	+				-0.4
2,520,647	+				-0.2
2,520,647	+				-0.2
2,520,647	+				+0.6
2,520,647	+				+0.1
2,520,647	+				-0.5
2,520,647	+				-0.0
2,520,647	+				-0.4
2,520,647	+				+0.8
2,520,648	-				+1.4
2,520,648	-				-0.0
2,520,648	-				-1.0
2,520,648	-				-2.2
2,520,648	-				+1.1
2,520,648	-				-0.5
2,520,648	-				+0.4
2,520,648	-				+0.3
2,520,648	-				+0.5
2,520,648	-				-0.6
2,520,680	+				+1.1
2,520,680	+				-0.7
2,520,680	+				+0.2
2,520,680	+				-0.1
2,520,680	+				+1.0
2,520,680	+				-0.6
2,520,680	+				+0.1
2,520,680	+				+0.4
2,520,680	+				-0.5
2,520,680	+				+0.2
2,520,681	-				+0.8
2,520,681	-				-0.2
2,520,681	-				+0.1
2,520,681	-				+0.4
2,520,681	-				-0.3
2,520,681	-				+0.5
2,520,681	-				+0.6
2,520,905	-		Ga0059261_2429	0.49	+0.3
2,521,031	+		Ga0059261_2429	0.74	+0.8
2,521,031	+		Ga0059261_2429	0.74	-0.2
2,521,031	+		Ga0059261_2429	0.74	-0.1
2,521,031	+		Ga0059261_2429	0.74	+0.2
2,521,031	+		Ga0059261_2429	0.74	+0.1
2,521,031	+		Ga0059261_2429	0.74	+0.3
2,521,031	+		Ga0059261_2429	0.74	+0.4
2,521,032	-		Ga0059261_2429	0.74	+0.9
2,521,032	-		Ga0059261_2429	0.74	-0.4
2,521,032	-		Ga0059261_2429	0.74	-1.2
2,521,032	-		Ga0059261_2429	0.74	-0.2
2,521,161	-				-0.3
2,521,195	+				-0.5
2,521,195	+				+0.4
2,521,195	+				-2.2
2,521,195	+				-0.3
2,521,195	+				+0.8
2,521,195	+				+0.5
2,521,196	-				+0.3
2,521,196	-				-0.3
2,521,196	-				+0.2
2,521,196	-				+0.2
2,521,196	-				-0.5
2,521,196	-				+0.8
2,521,196	-				+0.2
2,521,196	-				+0.0
2,521,197	-				-0.2
2,521,206	+				-0.2
2,521,834	+		Ga0059261_2431	0.28	+0.6
2,521,834	+		Ga0059261_2431	0.28	-0.1
2,521,834	+		Ga0059261_2431	0.28	-0.1
2,521,834	+		Ga0059261_2431	0.28	-1.5
2,521,834	+		Ga0059261_2431	0.28	-0.0
2,521,834	+		Ga0059261_2431	0.28	-0.1
2,521,834	+		Ga0059261_2431	0.28	+0.2
2,521,835	-		Ga0059261_2431	0.28	-0.1
2,521,835	-		Ga0059261_2431	0.28	-0.4
2,521,835	-		Ga0059261_2431	0.28	-0.2
2,521,835	-		Ga0059261_2431	0.28	+0.5
2,521,835	-		Ga0059261_2431	0.28	+0.1
2,521,835	-		Ga0059261_2431	0.28	-0.6
2,521,835	-		Ga0059261_2431	0.28	+0.1
2,521,835	-		Ga0059261_2431	0.28	+1.1
2,521,835	-		Ga0059261_2431	0.28	+0.1
2,521,835	-		Ga0059261_2431	0.28	-1.0
2,521,835	-		Ga0059261_2431	0.28	+0.3
2,521,835	-		Ga0059261_2431	0.28	+0.0
2,521,942	+		Ga0059261_2431	0.53	+0.9
2,521,943	-		Ga0059261_2431	0.53	+0.1
2,522,023	+		Ga0059261_2431	0.72	+2.4
2,522,023	+		Ga0059261_2431	0.72	-0.6
2,522,024	-		Ga0059261_2431	0.72	-0.1
2,522,024	-		Ga0059261_2431	0.72	+0.5
2,522,024	-		Ga0059261_2431	0.72	-0.2
2,522,035	+		Ga0059261_2431	0.74	+0.0
2,522,035	+		Ga0059261_2431	0.74	+0.8
2,522,035	+		Ga0059261_2431	0.74	+0.4
2,522,035	+		Ga0059261_2431	0.74	-0.0
2,522,035	+		Ga0059261_2431	0.74	+0.5
2,522,035	+		Ga0059261_2431	0.74	+1.1
2,522,035	+		Ga0059261_2431	0.74	+0.9
2,522,035	+		Ga0059261_2431	0.74	+0.5
2,522,035	+		Ga0059261_2431	0.74	-0.5
2,522,035	+		Ga0059261_2431	0.74	+0.7
2,522,035	+		Ga0059261_2431	0.74	-0.5
2,522,035	+		Ga0059261_2431	0.74	-1.5
2,522,035	+		Ga0059261_2431	0.74	-0.3
2,522,036	-		Ga0059261_2431	0.75	+1.5
2,522,036	-		Ga0059261_2431	0.75	-0.1
2,522,036	-		Ga0059261_2431	0.75	+0.7
2,522,124	-				+0.5
2,522,256	+				+0.4
2,522,257	-				-0.2
2,522,315	+				+0.1
2,522,315	+				-0.0
2,522,315	+				-0.9
2,522,315	+				+0.4
2,522,315	+				-0.1
2,522,316	-				-0.4
2,522,316	-				-0.9
2,522,316	-				-0.2
2,522,316	-				-1.7
2,522,316	-				-0.5
2,522,316	-				-0.5
2,522,316	-				-0.8
2,522,339	+				-0.2
2,522,340	-				+0.5
2,522,340	-				-0.6
2,522,340	-				-0.2
2,522,342	+				+0.9
2,522,342	+				+1.1
2,522,342	+				+0.0
2,522,342	+				-0.7
2,522,342	+				-0.1
2,522,342	+				-1.2
2,522,342	+				+0.1
2,522,342	+				-1.0
2,522,342	+				-0.3
2,522,342	+				+0.4
2,522,342	+				-0.2
2,522,342	+				-0.6
2,522,342	+				+0.7
2,522,342	+				+0.0
2,522,342	+				+0.2
2,522,342	+				-1.0
2,522,342	+				+0.1
2,522,343	-				+0.8
2,522,343	-				+1.1
2,522,343	-				-0.4
2,522,343	-				+0.4
2,522,343	-				-0.5
2,522,343	-				+0.8
2,522,343	-				-0.1
2,522,343	-				-0.2
2,522,343	-				+0.3
2,522,343	-				+0.1
2,522,343	-				+0.4
2,522,343	-				-0.7
2,522,343	-				+0.9
2,522,405	+		Ga0059261_2432	0.23	-0.7
2,522,405	+		Ga0059261_2432	0.23	+1.1
2,522,405	+		Ga0059261_2432	0.23	+0.2
2,522,405	+		Ga0059261_2432	0.23	-0.8
2,522,405	+		Ga0059261_2432	0.23	+1.1
2,522,406	-		Ga0059261_2432	0.24	+0.0
2,522,406	-		Ga0059261_2432	0.24	+0.0
2,522,406	-		Ga0059261_2432	0.24	-0.2
2,522,435	+		Ga0059261_2432	0.31	+0.7
2,522,435	+		Ga0059261_2432	0.31	+0.5
2,522,435	+		Ga0059261_2432	0.31	+0.7
2,522,435	+		Ga0059261_2432	0.31	+0.6
2,522,435	+		Ga0059261_2432	0.31	-0.1
2,522,435	+		Ga0059261_2432	0.31	+0.1
2,522,436	-		Ga0059261_2432	0.31	+0.1
2,522,436	-		Ga0059261_2432	0.31	-0.8
2,522,436	-		Ga0059261_2432	0.31	+1.1
2,522,436	-		Ga0059261_2432	0.31	+0.0
2,522,436	-		Ga0059261_2432	0.31	+1.4
2,522,436	-		Ga0059261_2432	0.31	-1.5
2,522,436	-		Ga0059261_2432	0.31	-0.2
2,522,507	+		Ga0059261_2432	0.48	-0.6
2,522,507	+		Ga0059261_2432	0.48	+0.1
2,522,507	+		Ga0059261_2432	0.48	+0.3
2,522,507	+		Ga0059261_2432	0.48	-0.5
2,522,507	+		Ga0059261_2432	0.48	-1.4
2,522,507	+		Ga0059261_2432	0.48	+0.3
2,522,507	+		Ga0059261_2432	0.48	+0.4
2,522,507	+		Ga0059261_2432	0.48	-0.2
2,522,508	-		Ga0059261_2432	0.48	-0.0
2,522,508	-		Ga0059261_2432	0.48	-1.0
2,522,508	-		Ga0059261_2432	0.48	+0.0
2,522,508	-		Ga0059261_2432	0.48	-0.1
2,522,508	-		Ga0059261_2432	0.48	-1.2
2,522,508	-		Ga0059261_2432	0.48	+1.0
2,522,508	-		Ga0059261_2432	0.48	+0.6
2,522,508	-		Ga0059261_2432	0.48	+0.5
2,522,508	-		Ga0059261_2432	0.48	+0.8