Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1917

Experiment: Choline chloride 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM
2,024,770	+				+0.2
2,024,771	-				+0.4
2,025,001	+		Ga0059261_1915	0.52	-0.6
2,025,001	+		Ga0059261_1915	0.52	-0.6
2,025,001	+		Ga0059261_1915	0.52	-1.6
2,025,002	-		Ga0059261_1915	0.52	-0.7
2,025,002	-		Ga0059261_1915	0.52	-2.3
2,025,002	-		Ga0059261_1915	0.52	+0.2
2,025,003	+		Ga0059261_1915	0.52	-0.4
2,025,003	+		Ga0059261_1915	0.52	-0.1
2,025,003	+		Ga0059261_1915	0.52	-0.1
2,025,004	-		Ga0059261_1915	0.53	-2.1
2,025,004	-		Ga0059261_1915	0.53	-2.3
2,025,025	-		Ga0059261_1915	0.58	-0.8
2,025,025	-		Ga0059261_1915	0.58	-0.2
2,025,065	-		Ga0059261_1915	0.67	-0.6
2,025,085	+		Ga0059261_1915	0.72	-0.5
2,025,086	-		Ga0059261_1915	0.72	-0.0
2,025,136	+		Ga0059261_1915	0.84	-0.7
2,025,136	+		Ga0059261_1915	0.84	+0.6
2,025,136	+		Ga0059261_1915	0.84	+1.0
2,025,137	-		Ga0059261_1915	0.84	-0.2
2,025,137	-		Ga0059261_1915	0.84	-0.1
2,025,137	-		Ga0059261_1915	0.84	+1.6
2,025,212	+				+0.6
2,025,212	+				-0.5
2,025,213	-				-0.5
2,025,311	+				-0.5
2,025,311	+				-1.2
2,025,311	+				-0.5
2,025,743	+				-0.9
2,025,743	+				-0.3
2,025,743	+				-0.4
2,025,744	-				-0.1
2,025,744	-				-0.0
2,025,744	-				+0.3
2,025,744	-				+0.2
2,025,900	+		Ga0059261_1917	0.17	+0.2
2,025,900	+		Ga0059261_1917	0.17	+0.3
2,025,900	+				+1.9
2,025,900	+		Ga0059261_1917	0.17	+0.7
2,025,900	+		Ga0059261_1917	0.17	+0.6
2,025,900	+				+0.5
2,025,901	-		Ga0059261_1917	0.17	+0.6
2,025,901	-		Ga0059261_1917	0.17	-0.5
2,025,901	-		Ga0059261_1917	0.17	-0.9
2,025,901	-		Ga0059261_1917	0.17	-0.4
2,025,901	-		Ga0059261_1917	0.17	+0.5
2,025,928	+		Ga0059261_1917	0.20	-1.1
2,025,928	+		Ga0059261_1917	0.20	-0.8
2,025,928	+		Ga0059261_1917	0.20	+0.5
2,025,928	+		Ga0059261_1917	0.20	+0.9
2,025,928	+		Ga0059261_1917	0.20	+0.5
2,025,929	-		Ga0059261_1917	0.20	-1.5
2,025,929	-		Ga0059261_1917	0.20	-0.2
2,025,929	-		Ga0059261_1917	0.20	+0.1
2,026,048	+		Ga0059261_1917	0.33	+0.6
2,026,048	+		Ga0059261_1917	0.33	-0.4
2,026,048	+		Ga0059261_1917	0.33	-0.1
2,026,048	+		Ga0059261_1917	0.33	-0.6
2,026,048	+		Ga0059261_1917	0.33	-0.5
2,026,048	+		Ga0059261_1917	0.33	+0.1
2,026,048	+		Ga0059261_1917	0.33	+0.7
2,026,048	+		Ga0059261_1917	0.33	+0.1
2,026,049	-		Ga0059261_1917	0.33	-0.6
2,026,049	-		Ga0059261_1917	0.33	+0.1
2,026,049	-		Ga0059261_1917	0.33	-0.1
2,026,049	-		Ga0059261_1917	0.33	+0.2
2,026,049	-		Ga0059261_1917	0.33	-0.7
2,026,049	-		Ga0059261_1917	0.33	-0.0
2,026,049	-		Ga0059261_1917	0.33	+0.5
2,026,049	-		Ga0059261_1917	0.33	-0.2
2,026,049	-		Ga0059261_1917	0.33	+0.3
2,026,049	-		Ga0059261_1917	0.33	+0.2
2,026,049	-		Ga0059261_1917	0.33	-0.0
2,026,049	-		Ga0059261_1917	0.33	+1.4
2,026,049	-		Ga0059261_1917	0.33	+0.2
2,026,049	-		Ga0059261_1917	0.33	+0.4
2,026,049	-		Ga0059261_1917	0.33	+0.1
2,026,173	+		Ga0059261_1917	0.47	-0.1
2,026,173	+		Ga0059261_1917	0.47	-0.5
2,026,173	+		Ga0059261_1917	0.47	+0.0
2,026,173	+		Ga0059261_1917	0.47	+0.7
2,026,174	-		Ga0059261_1917	0.47	+0.0
2,026,180	+		Ga0059261_1917	0.48	+0.1
2,026,180	+		Ga0059261_1917	0.48	-0.7
2,026,180	+		Ga0059261_1917	0.48	+0.2
2,026,180	+		Ga0059261_1917	0.48	+0.3
2,026,180	+		Ga0059261_1917	0.48	+0.2
2,026,180	+		Ga0059261_1917	0.48	+0.9
2,026,180	+		Ga0059261_1917	0.48	-0.2
2,026,180	+		Ga0059261_1917	0.48	+0.5
2,026,180	+		Ga0059261_1917	0.48	-0.1
2,026,181	-		Ga0059261_1917	0.48	-0.2
2,026,181	-		Ga0059261_1917	0.48	+0.3
2,026,181	-		Ga0059261_1917	0.48	-0.7
2,026,181	-		Ga0059261_1917	0.48	-0.5
2,026,220	+		Ga0059261_1917	0.52	+0.3
2,026,381	+		Ga0059261_1917	0.70	-1.2
2,026,381	+		Ga0059261_1917	0.70	-0.1
2,026,613	+				+0.9
2,026,627	+				+0.1
2,026,628	-				+0.1
2,026,628	-				+1.1
2,026,628	-				+0.5
2,026,628	-				+0.3
2,026,645	+				+0.7
2,026,645	+				-1.3
2,026,645	+				-0.0
2,026,645	+				+0.0
2,026,645	+				-0.5
2,026,645	+				+0.3
2,026,646	-				-0.0
2,026,646	-				-0.6
2,026,646	-				-0.7
2,026,646	-				+0.2
2,026,646	-				-0.1
2,026,646	-				-1.3
2,026,912	+		Ga0059261_1918	0.34	+0.4
2,026,913	-		Ga0059261_1918	0.34	-0.1
2,026,913	-		Ga0059261_1918	0.34	-1.2
2,026,913	-		Ga0059261_1918	0.34	-0.9
2,026,913	-		Ga0059261_1918	0.34	-0.9
2,027,086	+		Ga0059261_1918	0.56	-0.0
2,027,086	+		Ga0059261_1918	0.56	+0.1
2,027,086	+		Ga0059261_1918	0.56	+0.7
2,027,086	+		Ga0059261_1918	0.56	-0.1
2,027,086	+		Ga0059261_1918	0.56	+1.1
2,027,087	-		Ga0059261_1918	0.56	+1.8
2,027,087	-		Ga0059261_1918	0.56	+0.1
2,027,175	-		Ga0059261_1918	0.67	-0.1
2,027,175	-		Ga0059261_1918	0.67	-0.6
2,027,203	+		Ga0059261_1918	0.71	+0.2
2,027,203	+		Ga0059261_1918	0.71	-0.4
2,027,203	+		Ga0059261_1918	0.71	-0.1
2,027,204	-		Ga0059261_1918	0.71	-0.6
2,027,204	-		Ga0059261_1918	0.71	+0.9
2,027,204	-		Ga0059261_1918	0.71	+0.5
2,027,204	-		Ga0059261_1918	0.71	+0.4
2,027,209	+		Ga0059261_1918	0.72	+0.3
2,027,209	+		Ga0059261_1918	0.72	+0.0
2,027,209	+				+0.7
2,027,209	+		Ga0059261_1918	0.72	-0.5
2,027,209	+		Ga0059261_1918	0.72	-1.3
2,027,210	-				+0.4
2,027,210	-		Ga0059261_1918	0.72	-1.2
2,027,210	-		Ga0059261_1918	0.72	-1.2
2,027,210	-				+0.5
2,027,210	-		Ga0059261_1918	0.72	+0.5
2,027,210	-		Ga0059261_1918	0.72	+0.2
2,027,210	-		Ga0059261_1918	0.72	-0.1
2,027,501	-				-0.4
2,027,626	+				+0.5
2,027,626	+				-0.3
2,027,626	+				+0.7
2,027,627	-				+0.7
2,027,627	-				-0.1
2,027,627	-				+0.3
2,027,627	-				+0.4
2,027,628	+				-0.2
2,027,628	+				-0.5
2,027,628	+				-0.1
2,027,628	+				-0.7
2,027,628	+				+0.1
2,027,628	+				+0.1
2,027,629	-				+0.1