Experiment: Choline chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0782 and Ga0059261_0783 are separated by 80 nucleotides Ga0059261_0783 and Ga0059261_0784 are separated by 192 nucleotides
Ga0059261_0782: Ga0059261_0782 - DNA-directed RNA polymerase, beta subunit, at 816,686 to 820,840
_0782
Ga0059261_0783: Ga0059261_0783 - DNA-directed RNA polymerase, beta' subunit, predominant form, at 820,921 to 825,201
_0783
Ga0059261_0784: Ga0059261_0784 - hypothetical protein, at 825,394 to 827,610
_0784
Position (kb) 820
821
822
823
824
825
826 Strain fitness (log2 ratio) -2
-1
0
1 at 825.181 kb on + strand at 825.275 kb on + strand at 825.275 kb on + strand at 825.724 kb on + strand, within Ga0059261_0784 at 825.724 kb on + strand, within Ga0059261_0784 at 825.724 kb on + strand, within Ga0059261_0784 at 825.823 kb on + strand, within Ga0059261_0784 at 825.823 kb on + strand, within Ga0059261_0784 at 825.823 kb on + strand, within Ga0059261_0784 at 825.823 kb on + strand, within Ga0059261_0784 at 825.823 kb on + strand, within Ga0059261_0784 at 825.824 kb on - strand, within Ga0059261_0784 at 825.824 kb on - strand, within Ga0059261_0784 at 825.824 kb on - strand, within Ga0059261_0784 at 825.824 kb on - strand, within Ga0059261_0784 at 825.824 kb on - strand, within Ga0059261_0784 at 825.824 kb on - strand, within Ga0059261_0784 at 825.824 kb on - strand, within Ga0059261_0784 at 825.824 kb on - strand, within Ga0059261_0784 at 825.839 kb on + strand, within Ga0059261_0784 at 825.970 kb on + strand, within Ga0059261_0784 at 825.971 kb on - strand, within Ga0059261_0784 at 825.994 kb on + strand, within Ga0059261_0784 at 825.995 kb on - strand, within Ga0059261_0784 at 825.995 kb on - strand, within Ga0059261_0784 at 826.033 kb on + strand, within Ga0059261_0784 at 826.033 kb on + strand, within Ga0059261_0784 at 826.033 kb on + strand, within Ga0059261_0784 at 826.034 kb on - strand, within Ga0059261_0784 at 826.034 kb on - strand, within Ga0059261_0784 at 826.034 kb on - strand, within Ga0059261_0784 at 826.034 kb on - strand, within Ga0059261_0784 at 826.054 kb on + strand, within Ga0059261_0784 at 826.054 kb on + strand, within Ga0059261_0784 at 826.054 kb on + strand, within Ga0059261_0784 at 826.054 kb on + strand, within Ga0059261_0784 at 826.055 kb on - strand, within Ga0059261_0784 at 826.055 kb on - strand, within Ga0059261_0784 at 826.055 kb on - strand, within Ga0059261_0784 at 826.055 kb on - strand, within Ga0059261_0784 at 826.055 kb on - strand, within Ga0059261_0784 at 826.055 kb on - strand, within Ga0059261_0784 at 826.055 kb on - strand, within Ga0059261_0784
Per-strain Table
Position Strand Gene LocusTag Fraction Choline chloride 10 mM remove 825,181 + -0.3 825,275 + -2.0 825,275 + +0.3 825,724 + Ga0059261_0784 0.15 +1.6 825,724 + Ga0059261_0784 0.15 +0.2 825,724 + Ga0059261_0784 0.15 +0.7 825,823 + Ga0059261_0784 0.19 -1.2 825,823 + Ga0059261_0784 0.19 -0.2 825,823 + Ga0059261_0784 0.19 +0.1 825,823 + Ga0059261_0784 0.19 -0.4 825,823 + Ga0059261_0784 0.19 -0.8 825,824 - Ga0059261_0784 0.19 +0.4 825,824 - Ga0059261_0784 0.19 -0.3 825,824 - Ga0059261_0784 0.19 +0.0 825,824 - Ga0059261_0784 0.19 -1.0 825,824 - Ga0059261_0784 0.19 +0.3 825,824 - Ga0059261_0784 0.19 +0.1 825,824 - Ga0059261_0784 0.19 +1.4 825,824 - Ga0059261_0784 0.19 +0.5 825,839 + Ga0059261_0784 0.20 -0.2 825,970 + Ga0059261_0784 0.26 -0.6 825,971 - Ga0059261_0784 0.26 -1.4 825,994 + Ga0059261_0784 0.27 -0.4 825,995 - Ga0059261_0784 0.27 -0.9 825,995 - Ga0059261_0784 0.27 +0.4 826,033 + Ga0059261_0784 0.29 +0.2 826,033 + Ga0059261_0784 0.29 +0.8 826,033 + Ga0059261_0784 0.29 +0.4 826,034 - Ga0059261_0784 0.29 -0.0 826,034 - Ga0059261_0784 0.29 -0.8 826,034 - Ga0059261_0784 0.29 -0.0 826,034 - Ga0059261_0784 0.29 +0.1 826,054 + Ga0059261_0784 0.30 -0.2 826,054 + Ga0059261_0784 0.30 -0.8 826,054 + Ga0059261_0784 0.30 +0.7 826,054 + Ga0059261_0784 0.30 +0.9 826,055 - Ga0059261_0784 0.30 +0.5 826,055 - Ga0059261_0784 0.30 -0.4 826,055 - Ga0059261_0784 0.30 +0.2 826,055 - Ga0059261_0784 0.30 -0.2 826,055 - Ga0059261_0784 0.30 -0.5 826,055 - Ga0059261_0784 0.30 +0.2 826,055 - Ga0059261_0784 0.30 -0.2
Or see this region's nucleotide sequence