Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36300

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
3,596,473	+		RR42_RS36295	0.59	-0.8
3,596,501	+		RR42_RS36295	0.61	+0.3
3,596,502	-		RR42_RS36295	0.61	+0.4
3,596,521	+		RR42_RS36295	0.62	+0.6
3,596,543	-		RR42_RS36295	0.63	+1.0
3,596,543	-		RR42_RS36295	0.63	+0.4
3,596,699	+		RR42_RS36295	0.70	+0.7
3,596,701	+		RR42_RS36295	0.70	+0.1
3,596,701	+		RR42_RS36295	0.70	-1.2
3,596,701	+		RR42_RS36295	0.70	-0.4
3,596,701	+		RR42_RS36295	0.70	-0.7
3,596,701	+		RR42_RS36295	0.70	+0.1
3,596,701	+		RR42_RS36295	0.70	-0.4
3,596,702	-		RR42_RS36295	0.70	+0.1
3,596,702	-		RR42_RS36295	0.70	+0.5
3,597,531	+				+0.4
3,597,714	+		RR42_RS36300	0.31	+0.8
3,597,714	+		RR42_RS36300	0.31	-0.0
3,597,715	-		RR42_RS36300	0.31	+1.8
3,597,727	-		RR42_RS36300	0.32	+0.0
3,597,727	-		RR42_RS36300	0.32	-0.1
3,597,892	-		RR42_RS36300	0.53	+0.6
3,598,003	-		RR42_RS36300	0.66	+0.9
3,598,041	+		RR42_RS36300	0.71	+0.4
3,598,332	+				+1.2
3,598,659	-		RR42_RS36305	0.33	-0.4
3,598,659	-		RR42_RS36305	0.33	+0.8
3,598,659	-		RR42_RS36305	0.33	-0.0
3,598,659	-		RR42_RS36305	0.33	+1.8
3,599,242	+				+0.2
3,599,273	+				-0.4
3,599,273	+				-0.7