Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34715

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
3,230,547	-		RR42_RS34710	0.72	+1.0
3,230,547	-		RR42_RS34710	0.72	-0.9
3,230,547	-		RR42_RS34710	0.72	+0.1
3,230,888	+				-1.5
3,230,889	-				+1.4
3,230,889	-				-0.0
3,231,254	+				-0.6
3,231,410	-				-0.3
3,231,415	+				+0.3
3,231,539	+				+0.4
3,231,540	-				+0.0
3,231,540	-				-1.4
3,231,624	-		RR42_RS34715	0.24	-1.8
3,231,749	-		RR42_RS34715	0.54	-0.8
3,231,810	+		RR42_RS34715	0.68	-1.5
3,231,811	-		RR42_RS34715	0.69	+0.0
3,232,021	-				-0.5
3,232,119	+				-0.9
3,232,401	+		RR42_RS34720	0.11	+0.2
3,232,401	+		RR42_RS34720	0.11	-1.3
3,232,402	-		RR42_RS34720	0.11	-0.7
3,232,402	-		RR42_RS34720	0.11	-1.2
3,232,402	-		RR42_RS34720	0.11	+1.3
3,232,402	-		RR42_RS34720	0.11	-2.2
3,232,405	+		RR42_RS34720	0.11	-0.1
3,232,405	+		RR42_RS34720	0.11	-0.0
3,232,712	+		RR42_RS34720	0.30	-2.0
3,232,713	-		RR42_RS34720	0.30	+1.0
3,232,732	+		RR42_RS34720	0.31	+0.1
3,232,732	+		RR42_RS34720	0.31	+0.8
3,232,732	+		RR42_RS34720	0.31	+0.1
3,232,733	-		RR42_RS34720	0.31	+1.6