Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34530

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
3,180,810	+				-0.9
3,180,889	+				+0.0
3,180,890	-				+0.6
3,180,890	-				+0.0
3,180,950	-				-0.2
3,181,083	+				-0.1
3,181,091	+				+0.1
3,181,099	+				+1.5
3,181,099	+				+1.1
3,181,100	-				-1.2
3,181,100	-				-0.1
3,181,100	-				-0.4
3,181,100	-				-0.9
3,181,108	-				+0.4
3,181,124	-				-0.5
3,181,583	+		RR42_RS34530	0.36	+1.0
3,181,584	-		RR42_RS34530	0.37	-0.2
3,181,584	-		RR42_RS34530	0.37	+0.0
3,181,694	+		RR42_RS34530	0.45	-2.4
3,181,694	+		RR42_RS34530	0.45	+0.7
3,181,695	-		RR42_RS34530	0.45	-1.8
3,181,695	-		RR42_RS34530	0.45	-0.2
3,181,695	-		RR42_RS34530	0.45	+0.2
3,181,757	+		RR42_RS34530	0.50	+0.1
3,181,758	-		RR42_RS34530	0.51	+1.6
3,181,763	+		RR42_RS34530	0.51	+0.6
3,181,764	-		RR42_RS34530	0.51	+0.8
3,181,764	-		RR42_RS34530	0.51	+1.7
3,181,847	-		RR42_RS34530	0.58	-0.1
3,182,247	+				-0.2
3,182,248	-				+0.5
3,182,248	-				+0.2
3,182,373	+				-0.6
3,182,374	-				+1.6
3,182,410	+		RR42_RS34535	0.15	-2.0
3,182,410	+		RR42_RS34535	0.15	-0.6
3,182,599	+		RR42_RS34535	0.88	-1.1
3,182,726	-				-0.1
3,182,800	+				-0.0
3,182,825	+				-0.7
3,182,922	-				+0.1
3,182,946	-				-0.2
3,183,068	-				+0.2
3,183,072	-				+0.8
3,183,081	-				+0.2
3,183,081	-				+0.6
3,183,117	+				+0.7
3,183,268	-				+1.5
3,183,269	+				+0.0
3,183,269	+				+0.6
3,183,286	+				+0.4
3,183,331	+				-0.5
3,183,332	-				-2.7
3,183,360	+				+0.5